Vibrio ostreae: KNV97_13910
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Entry
KNV97_13910 CDS
T08661
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
vos
Vibrio ostreae
Pathway
vos02020
Two-component system
vos02024
Quorum sensing
vos05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KNV97_13910
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KNV97_13910
05111 Biofilm formation - Vibrio cholerae
KNV97_13910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vos02022
]
KNV97_13910
Two-component system [BR:
vos02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
KNV97_13910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_2
HTH_23
AAA_19
AAA_22
TIP49
HTH_29
PIF1
HTH_7
Peripla_BP_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QXO16582
UniProt:
A0A975U7G8
LinkDB
All DBs
Position
1:complement(1711915..1713279)
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AA seq
454 aa
AA seq
DB search
MVEDTASVAALYRSYLTPLEIDINIVGTGRDAIESIAKRTPDLILLDLRLPDMTGMDVLH
EVKKQSPDVPVIFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN
DTDSTNQNYQGFIGSSHNMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRG
DKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGGTLFLDELCEMDLDL
QTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHL
PPLRERGDDVIEIAYSLLGYMSKEEGKGFVRLAPGVVERFRKYEWPGNVRQLQNVLRNVV
VLNEGSEIALEMLPPPLSQPIESENILPNVGQGRISVHEIFPLWMTEKQAIENAIEACDG
NIPRAAGYLDVSPSTIYRKLQTWNEKEQEKENEK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagacacggcttcggtcgcggcgctgtatcgttcttatctgactcctctggag
atcgatatcaatattgtcggtaccgggcgtgacgcgatcgaaagtatcgcgaaacggact
ccggatctgatcctgctcgatttacgcctgccagatatgacgggtatggatgtgctgcac
gaagtgaagaagcaatcgccggatgtcccggtgattttcatgacagcgcacggctctatc
gataccgcagtggaagcgatgcgccacggtgctcaggatttccttatcaaaccgtgtgaa
gcggaccgtttgcgtgtcacagtaaataatgcgatccgcaaggccagcaagcttaaaaat
gacaccgacagcaccaatcagaactatcagggcttcatcggcagcagtcacaatatgcaa
gcggtctatcgcacgattgactcggctgcgagcagtaaagccagtatctttatcaccggt
gaaagcggtacaggtaaagaagtgtgtgccgaagccatccatgccgccagcaagcgcggt
gacaagccgttcatcgcgattaactgtgctgcgattccaaaagacttgatcgaaagtgag
ttgttcggccacgtaaaaggtgcctttaccggtgctgccaccgatcgtcagggtgcggct
gaactggcagacggcggcactctgtttttggatgaattgtgtgaaatggatctggactta
cagaccaagctgttgcgctttatccagaccggtacctttcagaaagtcggttcatcgaaa
atgaaaagtgtcgatgtccgttttgtctgtgcaaccaaccgcgacccctggaaagaggtg
caggaaggacgttttcgtgaagacttatactaccgtttgtacgtgattccgctccattta
ccgccactgcgtgagcgtggtgacgatgtgattgaaattgcttattccctgctgggctac
atgtctaaagaagaaggcaaaggctttgtccgcctggctccgggtgtggtcgaacggttc
agaaagtacgagtggccgggcaatgtgcgccagctgcagaacgtgctgcgtaatgtggtg
gtattgaatgaaggcagtgagatcgcgcttgaaatgctgccaccgccgctgagtcagccg
attgaatcggaaaatatcttgccaaatgttggtcagggtcgcatttctgtgcatgaaatt
ttcccattatggatgacagagaaacaggcgattgaaaacgctatcgaagcgtgtgatggt
aatattccgcgtgcggcgggttatttggatgttagtccatcgaccatttatcgtaagctg
cagacctggaacgaaaaagaacaagaaaaggaaaatgaaaagtag
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