Vibrio ostreae: KNV97_14380
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Entry
KNV97_14380 CDS
T08661
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vos
Vibrio ostreae
Pathway
vos03030
DNA replication
vos03430
Mismatch repair
vos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KNV97_14380 (holA)
03430 Mismatch repair
KNV97_14380 (holA)
03440 Homologous recombination
KNV97_14380 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vos03032
]
KNV97_14380 (holA)
03400 DNA repair and recombination proteins [BR:
vos03400
]
KNV97_14380 (holA)
Enzymes [BR:
vos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KNV97_14380 (holA)
DNA replication proteins [BR:
vos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KNV97_14380 (holA)
DNA repair and recombination proteins [BR:
vos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KNV97_14380 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QXO16667
UniProt:
A0A975YMF6
LinkDB
All DBs
Position
1:1815128..1816153
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AA seq
341 aa
AA seq
DB search
MRLYADKLADALQKSLLPVYLVFGNEPLLIQESRSAIEQQARSQGFEEKHRFQIDASLDW
NEVYDCCQSMSLFSSRQLIELEIPEAGLNAAAGKELAKLADSLNPDILLVIVGPKPTRAQ
ENSAWFKALSAHGVMVNCLTPDISRLPQFVTTRCRALGLQPDAEAVQMLAQWHEGNLFAL
AQSLEKLLLLYPDRQLTLVRLEESLSRHNHFTPFHWIDALLEGKANRAQRILRQQAAEGV
EPIILMRTAQKELFQLLQMRQAMNSQPIGSLFDKYRIWQNKRPLYAAALQRLSVQHLQHL
VRLLAQCEIVAKTQYEQSPWPLLHQLSLECCVPQANLPLPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagattgtatgctgacaaactggccgacgcgctgcaaaagtcgctgctgccggtttat
ctggtgttcggcaacgagcctttgctgattcaggaatcgcgcagcgcgattgaacagcag
gcgcgcagccagggttttgaggaaaaacatcgttttcagatcgatgccagcctcgactgg
aacgaagtgtatgactgctgccagtcaatgagcctgttttccagccgtcagttgatcgag
ctggaaattcccgaggcgggtctgaatgccgccgcaggtaaagagctggccaagctggct
gacagcctcaatccggatattttgctggtcatcgtcggtccgaaaccgacccgggcgcag
gaaaacagcgcctggtttaaggcgctgagtgcgcacggcgtgatggtcaactgcctgacg
cccgacatcagccgcctgccccagtttgttaccacgcgctgccgggcgttaggtttacag
cccgacgccgaagcggttcaaatgctggcacagtggcacgaaggtaacctgtttgccctg
gcccagagcctggagaaactgctcctgctttacccggatcgccagctcactctggtgaga
ctggaagagtcgctcagccgccataaccactttacaccgtttcactggattgatgcgctg
ctggaaggcaaagccaaccgtgctcagcgcatattgcgccagcaagcggccgaaggcgtg
gagccgattatcctgatgcgaacagcacaaaaagagctgtttcagctgctgcagatgcgc
caggcgatgaacagtcagcctatcggtagcctgtttgataaatatcgtatctggcaaaac
aaacgtccgttatacgccgccgctctgcaacgtctgtcagtgcagcatctgcaacatctg
gtgcgcttacttgcccaatgcgaaattgtggcaaaaactcaatatgaacagtcgccctgg
ccgttattacaccaactgagcctggagtgctgtgttccgcaggcaaacttacccttgcct
gcctga
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