Vibrio ostreae: KNV97_15300
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Entry
KNV97_15300 CDS
T08661
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vos
Vibrio ostreae
Pathway
vos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KNV97_15300 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vos03400
]
KNV97_15300 (recD)
Enzymes [BR:
vos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KNV97_15300 (recD)
DNA repair and recombination proteins [BR:
vos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KNV97_15300 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
AAA_11
Helicase_RecD
UvrD-helicase
Viral_helicase1
SLFN-g3_helicase
AAA_22
nSTAND3
AAA_16
AAA_28
UvrD_C
TrwB_AAD_bind
ResIII
T2SSE
NTPase_1
MukB
CbiA
DEAD
SRP54
AAA_7
NPHP3_N
DUF87
Motif
Other DBs
NCBI-ProteinID:
QXO19352
UniProt:
A0A975YPZ1
LinkDB
All DBs
Position
1:complement(2007144..2009291)
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AA seq
715 aa
AA seq
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MTFDEVQTTLQQLSQQGGLRQIDYQFARFITAQCPAGQLSEAQRSVLLLVAAAVSAELGR
GHICLPLRDEQGNALDLAARLGLFGDAALPLNQLWLACDWAELVKQCTLLGAQGEAVPLM
YDGERLYLHRYWHYEVTLAQRLQSFGTPMILKPAEVDNLRLRLDNLFARDYRFLHQALSP
DLNQVARQRLVCDLLDVVDEGALDWDAIDAKLQGAPRLTDLNVLDSLVPQAHCLNWQKVA
AAIALTRRFAVISGGPGTGKTTTVTKLLAALISQSQQQGHIPAIKLVAPTGKAAARLTES
IGKAVADLAVEPELKALIPTESSTIHRLLGAIPDSAEFRHHAANRLHLDVLVVDEASMVD
LPMMVKLVDALPAHARLILLGDKDQLASVEAGAVLGDICSFLQQGYSAEQSQLLARLTGF
MPAALNPRQDEIAAGARAAVSDSLCMLQKSYRFDARSGIGQLAKAVNSGQAMWIDRVWQQ
DFADIAHFALSGEHYHQMLQSLVTGYTPYLQRLRQPLQAAESDRAAESMADKAREVLTLF
SQTRLLCALREGDFGVTGLNVRIERALAARKLIKVQDELWYSGRPVMVTRNDHALGLYNG
DIGICLRDEQDDQQRLKVYFELPDGSVKAVLPSRVPLHETAYAMTIHKSQGSEFDFTLLI
IPPEFSPILTRELVYTGITRAKRRLALYCDMGVMKRAIKLKTQRASGLVQRLSAS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgatgaggtacaaaccaccttacagcagctaagccagcagggcgggctgcgc
cagatcgattaccagttcgcgcgctttataaccgcgcagtgtccggccggacaactgagt
gaggcgcagcgcagtgtactgctgctggtggcggcagcggtcagcgcagagctggggcgc
ggtcatatctgcctgccgctgcgtgatgagcagggcaatgcactggatctcgccgcccgg
ctcggcttgtttggggatgccgcgctgccgcttaatcagttatggctggcctgtgactgg
gccgagctggttaagcagtgcactttgcttggcgcgcagggcgaagcggtgccgctgatg
tacgacggtgaacggctgtatctgcatcgttactggcactatgaagtgactctggcgcag
cgcttacagagctttgggacacccatgatcctaaagcctgcggaggtcgataatctgcgt
ctgcggctggataatctgtttgcccgtgactatcgctttttgcatcaggcgctcagcccg
gatctcaatcaggtcgcgcgccagcgtctggtgtgtgacctgttggatgtggtcgatgag
ggagcactggattgggacgcgattgatgccaagttgcagggggcgccgcgcctgacggat
ttgaacgtgctggacagcttagtgccgcaggctcactgcctcaactggcagaaagtggcg
gcggcgattgcgctgacgcgccgttttgcggtgatttccggcggccccggcaccggtaaa
accaccacggtgaccaaactgcttgcggcgctgatcagccagtcgcagcagcagggccat
attccggccatcaagctggtggcgccgaccggtaaggccgccgcgcggctgaccgagtcg
atcggcaaagctgtcgcggatctagcggtggagccggaacttaaagcgctgatcccgact
gaatcgagcaccatccaccggctgctgggcgctattccggacagcgcggagttccgtcat
cacgccgctaaccggctgcacctggatgtgctggtggttgatgaagcctcaatggtcgat
ttgcctatgatggtcaaattagtcgatgcgttgcccgcacacgcgcgtctgatcctgctt
ggcgataaagaccagcttgcctcggtcgaggccggtgcggtgctgggcgatatctgctct
tttctgcagcagggttacagtgccgaacaaagtcagctgctggcgcgcttaaccggattt
atgccggcggcgcttaacccgcgtcaggatgagattgccgcaggtgcccgcgcagcggtc
agcgacagtttatgtatgctgcaaaagagttaccgcttcgatgcccgctccggaataggc
cagctggccaaagccgtcaacagcggtcaggcaatgtggattgaccgggtgtggcagcaa
gattttgccgacattgcccattttgcgctcagtggtgagcattaccatcagatgctgcag
tcgctggtgacaggttatacgccgtatctgcagcgcctgcgtcagccgctgcaagctgcg
gagtccgatcgcgctgcggagtcgatggccgataaagcgcgcgaggtactgactttgttc
agtcagacccgcttattgtgcgcgctgcgcgagggtgactttggcgtcaccggacttaac
gtgcggattgagcgcgctctggcggcacgcaaactgatcaaagttcaggatgagctctgg
tacagtggccgcccggtgatggtgacccgcaatgatcacgctctgggattatataacggc
gatattggtatctgcctgcgcgatgagcaggacgatcagcaacggcttaaagtctatttt
gagctgccggacggcagcgtaaaagcggtcttgccaagccgggttcctctgcatgaaacc
gcctatgcgatgacgattcataaatcccagggcagtgaatttgattttactctgctgatt
ataccgccggaattcagcccgatcctgacccgtgagctggtctataccggtattacccgc
gccaagcgtcgtttggcactgtattgtgatatgggcgtgatgaagcgggcgatcaagctg
aaaacccagcgtgccagtggtttggtgcagcgtttaagcgcgtcctga
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