Vibrio ostreae: KNV97_16075
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Entry
KNV97_16075 CDS
T08661
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vos
Vibrio ostreae
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vos03016
]
KNV97_16075 (truD)
Enzymes [BR:
vos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KNV97_16075 (truD)
Transfer RNA biogenesis [BR:
vos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KNV97_16075 (truD)
Prokaryotic type
KNV97_16075 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Nkap_C
Motif
Other DBs
NCBI-ProteinID:
QXO16963
UniProt:
A0A975U856
LinkDB
All DBs
Position
1:complement(2182076..2183122)
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AA seq
348 aa
AA seq
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MTDLLSSLAYLCGKPTAKAKIKAKPEHFKVFEELGYEFSGQGEQVMIRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPQGKFPNLAQFEAQYPSIEVLAMQRH
NKKLRPGDLQGNRFEVTLSEVSDMDDVLQRLQVVAQQGVPNYFGNQRFGRDGNNLHEARR
WGRENVRTRNQSQRSLYLSSARSWIFNHIVSARIEAGCFYRFIDGDIALQGKEQSLVEAD
KLSEWNALLEQGQAAISAALAGDNALPTRSDALALEQPQLDAEPDLLKLIGGNRMRHDRR
AVSMMPQDLSWDVNGDEITLRFALDAGSFATSIVRELVEEIAVERVYE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcttttatcatcgttggcttatttatgtggtaaaccaacagcgaaagcaaaa
atcaaagccaagccggaacactttaaggtgtttgaggagctgggctacgagttcagtggt
cagggcgaacaggtaatgatccggattcgcaaaaccggtgagaataccagttttgttgcc
aatgaactggccaaagcgtgcggcgtgaagtcgaaagacgtcagctgggccggcctgaaa
gaccgccatgcggtgaccgagcagtggctgagtgttcacctgccacagggtaagttcccc
aatctggctcagtttgaagcccagtatccgagtattgaggtgctggcgatgcagcgtcac
aataaaaagctgcgtccgggcgatctgcagggcaaccggtttgaggtgaccttaagtgaa
gtcagcgatatggatgatgtgctgcaaaggttgcaagtagttgcacagcaaggcgttccg
aattattttggtaatcagcgctttggccgcgatggcaataacctgcatgaagcgcggcgc
tggggacgagagaatgtgcgtacccgcaaccagagtcagcgtagcctgtatctgtccagt
gcccgttcgtggatctttaatcatatcgtgtctgcgcgcattgaggccggctgtttttat
cgctttattgacggcgacatcgccctgcaaggtaaggagcagtcattggttgaggccgat
aagctcagcgaatggaacgcgctgctggaacaaggtcaggcggcgatttctgcggcgttg
gcgggtgacaacgcgctgccaacccgtagtgacgcgctggcgctggagcagccgcagctg
gatgcggagccggacctgctcaagctgattggcggtaaccgtatgcgtcatgatcgacgt
gcggtgtcgatgatgccgcaggatctgagctgggacgtcaacggtgatgagattaccctg
cgctttgcgctggatgccggcagcttcgcgacctcgattgtacgcgagctggtggaagag
attgccgtcgaacgggtctatgagtga
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