Vibrio ostreae: KNV97_17910
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Entry
KNV97_17910 CDS
T08661
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vos
Vibrio ostreae
Pathway
vos00541
Biosynthesis of various nucleotide sugars
vos01100
Metabolic pathways
vos01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KNV97_17910 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vos01005
]
KNV97_17910 (rfaD)
Enzymes [BR:
vos01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KNV97_17910 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vos01005
]
Core region
KNV97_17910 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
NAD_binding_10
Phage_T7_Capsid
adh_short
Motif
Other DBs
NCBI-ProteinID:
QXO17255
UniProt:
A0A975U981
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All DBs
Position
1:2566896..2567834
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AA seq
312 aa
AA seq
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MIIVTGGAGMIGSNIVKALNDRGITDILVVDHLKNGRKFKNLVDLQITDYMDRDDFLTQV
MAGDDFGPIEAVFHEGACSATTEWDGKYMMLNNYEYSKELLHFCLDREIPFLYASSAATY
GETDTFIEEPQYEGALNVYGYSKQQFDNYVRRLWQDAAEHGEKLPQVTGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSETFKRDFVYVGDVAAVNLWFMDHGVSGIFNC
GTGKAESFNEVAKAVIAHHGKGDVETIPFPDHLKGAYQEYTQADLTKLRAAGCDVEFKTV
AQGVAEYLAIIN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggtgctggcatgattggcagcaatattgtgaaagctctgaat
gaccgtggtatcacggatattctggtggtcgatcatcttaaaaatggccgtaaatttaag
aatctggttgatttgcagatcaccgattacatggaccgtgacgactttctgactcaggta
atggccggtgatgatttcggcccgattgaagccgtattccatgagggcgcctgttcagcc
accaccgagtgggatggcaagtacatgatgctcaacaactatgagtactccaaagagctg
ctgcacttctgcctcgatcgtgaaatcccgttcttgtatgcctcatcggctgcgacttat
ggtgaaaccgatacctttattgaagagccacaatatgaaggtgcgctcaatgtctacggt
tactccaaacagcagtttgacaactacgtacgccgcctgtggcaagatgccgcagaacac
ggtgaaaaactgccgcaagtgactggcttccgttactttaacgtctatggcccgcgcgag
cagcacaaaggttctatggcatccgtagcgttccacctgaacaaccagatgaacgcgggt
gaaaacccgaaactgtttgccggcagtgaaaccttcaaacgtgatttcgtttacgtcggt
gatgtagcagcggtaaacctgtggtttatggatcacggcgtgtccggcatctttaactgc
ggcactggtaaagcggaatcatttaatgaagtggccaaagcggtcatcgcgcatcacggc
aaaggcgacgtggaaaccattccgttcccggatcacctcaaaggtgcttaccaggaatac
actcaggccgatctgaccaagctgcgcgccgcaggctgtgatgttgagttcaaaaccgtc
gcccaaggtgtggcagagtatttagcaattattaattaa
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