Vibrio ostreae: KNV97_19270
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Entry
KNV97_19270 CDS
T08661
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vos
Vibrio ostreae
Pathway
vos00300
Lysine biosynthesis
vos00470
D-Amino acid metabolism
vos01100
Metabolic pathways
vos01110
Biosynthesis of secondary metabolites
vos01120
Microbial metabolism in diverse environments
vos01230
Biosynthesis of amino acids
Module
vos_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KNV97_19270 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KNV97_19270 (dapF)
Enzymes [BR:
vos01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KNV97_19270 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SrpI-like
RGM_C
PH1_SSRP1-like
Motif
Other DBs
NCBI-ProteinID:
QXO17485
UniProt:
A0A975U989
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All DBs
Position
1:2856450..2857280
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSPDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYSISVSTKKGKMVLNVEDDDQITVNM
GVPEFEPNKIPFRAKQTEKTYIMRVGEQTLFCGAVSMGNPHVVTVVDDVKTANVETLGPL
LESHERFPERVNAGFMQVVSRNAVNLRVYERGAGETQACGSGACGAVAVGIVQGLLDETV
TVSLPGGSLVISWKGPGKPLFMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccatttttctaaaatgcacggtttgggtaatgactttatggtcgtggactgc
attacccagaacgtcttcttctcccctgatctgatccgccgtctggcggatcgtcatacc
ggggtgggttttgaccagctgttggtggttgaagcgccttatgatccggaaacggatttt
cactatcgaattttcaatgccgatggcagcgaagtcgagcagtgtggtaacggcgcgcgt
tgttttgcccgctttgtacgcatgaaggggctgaccaataagtacagcatcagcgtcagt
accaagaaaggcaagatggtgctcaatgtcgaagacgatgaccagatcaccgttaacatg
ggagtgccggagttcgaaccgaataagattccgttccgtgctaagcagaccgaaaagacc
tacattatgcgcgttggtgagcagactctgttctgtggtgcggtcagcatgggtaacccg
catgtggtgaccgtggtcgatgatgtcaaaaccgccaatgtggaaaccctgggcccgctg
ctggagtcgcatgagcgtttccctgagcgggttaatgccggttttatgcaggtcgtaagc
cgtaatgcggtcaatctgcgtgtctatgaacgcggtgccggggaaacccaggcctgtggc
agcggcgcttgtggcgcggttgcggtcggcattgttcagggtctactggatgaaaccgtc
acggtcagtttaccgggcggctctctggtgattagctggaaaggaccgggtaaaccgctg
tttatgaccggccctgcaacccatgtttttgacggccagctgtcttgctaa
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