Vibrio ostreae: KNV97_21440
Help
Entry
KNV97_21440 CDS
T08661
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vos
Vibrio ostreae
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vos03016
]
KNV97_21440 (truB)
Enzymes [BR:
vos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KNV97_21440 (truB)
Transfer RNA biogenesis [BR:
vos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KNV97_21440 (truB)
Prokaryotic type
KNV97_21440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QXO17860
UniProt:
A0A975UA01
LinkDB
All DBs
Position
1:3315021..3315971
Genome browser
AA seq
316 aa
AA seq
DB search
MARRRKGRAINGVLLLDKATGMSSNDILQKVKRLFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGQRTDTSDSDGEVVQTRAVNVDHDTLLAKIESFRGETDQ
VPSMFSALKYQGRPLYEYARKGIDVPREARKITVYDIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAHYPYQNMVTLEELNALVEQAHREERSPYEALDALL
LPMDTAVEDLPEVNLIPELMHMVQHGQAVQIFGAPEQGYVRLTGGDEKLFLGVGEMNDDG
KIAPKRLVVYREDSAQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgtaaaggccgggcgataaacggtgtcctgttactggataaagcaacg
ggcatgtcatcgaacgacattttacaaaaagtgaagcgtttgtttttcgccgagaaggcc
ggtcataccggagctctggacccgttagcaacgggtatgttgccgatttgtcttggggaa
gcgactaagttttcccagttcctgctcgactccgataagcgttatcgcgtgattgccaaa
ctgggccagcgtactgatacgtctgactcggatggtgaagtggtgcaaacccgcgcggtg
aatgtcgaccatgatacgctgctggctaagattgaatctttccgtggtgaaaccgatcag
gtaccgtcgatgttttcggcgctcaaatatcagggccgcccgttgtacgagtatgcccgt
aaagggattgatgtaccgcgcgaagcgcgcaaaatcaccgtttacgatatcgttctgcac
cgttttgaaggcgatgaagtggaaatggaagtgcactgttctaaagggacttacatccgc
accatcgtcgatgacctgggcgagatgctcggctgtggcgcccatgtgaccatgctgcgt
cgtaccggtgtggctcactatccttaccagaatatggtgaccctggaagagcttaatgcg
ctggttgagcaggcgcatcgcgaagagcgctctccgtacgaggctctggatgcgttgttg
ctgccgatggataccgcggtggaagacctgccggaagtgaatctgatccccgaactgatg
cacatggtgcagcatggtcaggcggtgcagattttcggcgcgccggaacagggttacgtg
cgtttgaccggcggggacgagaagttgtttctcggcgtcggtgagatgaacgatgatggg
aagatcgcaccaaaacgcttagtggtataccgcgaggattccgcgcagtaa
DBGET
integrated database retrieval system
