Vibrio owensii: A9237_03210
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Entry
A9237_03210 CDS
T04844
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vow
Vibrio owensii
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vow03032
]
A9237_03210
03400 DNA repair and recombination proteins [BR:
vow03400
]
A9237_03210
Enzymes [BR:
vow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A9237_03210
DNA replication proteins [BR:
vow03032
]
Prokaryotic type
DNA Topoisomerases
A9237_03210
DNA repair and recombination proteins [BR:
vow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A9237_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AQW57186
UniProt:
A0A3G2PUG8
LinkDB
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Position
1:complement(739242..741878)
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AA seq
878 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGEKKAAAISTKGMSPE
EKARVKKEKDRKALIKKMGINPYHDWDANYQILPGKEKVVSELQKLAKDADFVYLATDLD
REGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFQTPGELNMDGVNAQQARRFMDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREINAFIPEEFWDINANTHTKDKTA
FKLLVAQKDGVAFKPVNETETKAALSVLEKASYEVCKREDRPTKSKPSAPYITSTLQQAA
STRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVDAVRGFIGSEYGDKYLPANPL
RYGSKEGAQEAHEAIRPSDVAVKAEDLQGVDADAHKLYSLIWNQFVACQMTPAEYDSTTI
SVKAAEYTLKAKGRILKFDGWTRVQRPMGKNEDTILPAVQLGDKLDLESLEPKQHFTKPP
ARFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFYAEKMGEIVTDRLDDSF
NDLMNYDFTARMEQKLDQIAEGDVMWKDVLDNFFTDFTGDLEKAEQDENEGGMKLNHIVM
TDIECPTCGRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIINVLEEDVETAA
LRAKKRCPICETAMDAYLIDDKRKMHVCGNNPNCEGYIVEYGEFKVKGYDGPVVECDKCG
SDMVLKNGRFGKYMDCTSETCKNTRKILKNGEVAPPKEDPVHFPELPCENSDAYFVLRDG
ASGLFMAASNFPKSRETRAPLVSELARFEERLPEKFKYLTTAPAADPDGRPAVVRFSRKS
KENYVRTEDDGKPSGWTALFIDGKWEITDKRKKPKAKA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctcgttatagtggagtcaccagccaaggctaagacgataaataaatac
cttggtaaagactttattgttaagtctagtgttggtcacgtgcgtgatctgcctacggcc
ggtcaaagcactggtgagaaaaaagccgctgccatttctactaaaggaatgagcccggaa
gagaaagcgcgtgtcaaaaaagaaaaagaccgtaaagctctaatcaaaaaaatggggatt
aacccatatcatgactgggatgcgaattaccaaatccttccaggcaaagaaaaagtagtt
agtgaactgcaaaaattagccaaagacgctgatttcgtttatctcgcaaccgatttggac
cgcgagggagaagctatcgcatggcaccttcgtgagatcatcggtggcgatgaagagcga
tacaaacgtgtagtttttaacgagattactaagaatgcaatccaacaagctttccagacg
cctggtgagttgaatatggatggtgttaacgcacagcaagcacgtcgattcatggaccgc
gtagtaggtttcatggtttctccattgctatggaagaaagttgcacgtggcttgtctgcg
ggtcgtgtacagtcagtagcggtaaaactattggttgagcgtgagcgtgaaatcaacgct
ttcattccagaagaattctgggacatcaacgcaaatacacacaccaaagataagacggca
ttcaaactgcttgttgcgcaaaaagatggcgttgcgtttaagcctgtcaacgagacagag
accaaagcagcgctttcggtactggaaaaagcaagctacgaagtttgtaagcgcgaagac
cgcccaacgaagagtaagccgtctgctccatacattacctcaacacttcagcaagcggcg
agtactcgcctaggctacggtgttaagaagaccatgatgctggctcagcgtctgtatgaa
gcgggttacatcacgtatatgcgtactgactcaaccaatttgagtgcagaagcggtagat
gcagttcgtggcttcatcggctcagagtatggcgataaataccttcctgctaacccgtta
agatacggtagcaaagaaggcgcacaagaagcgcacgaagcgattcgtccttctgatgta
gcggtgaaagcagaagacctacaaggtgttgatgctgacgctcacaagctttactcattg
atttggaatcaattcgttgcatgtcaaatgacaccagcagaatacgattcaaccactatc
agcgttaaagctgcggaatacacgctgaaagcgaaaggccgtatccttaagtttgatggt
tggactcgcgtgcaacgcccaatgggtaaaaacgaagacacgattcttccagcagttcag
ttgggcgataagctagacctagaatcgcttgagcctaagcagcactttactaagccacca
gcgcgctttacagaggcggcattggttaaagaacttgagaagcgtggtattggccgtcct
tctacatacgcatctatcatctctacgatccaagatcgtggctacgtgaaagtagaccag
cgccgtttctacgcagagaagatgggtgagattgttactgaccgtctagatgacagcttt
aacgatctgatgaactacgacttcacggctcgtatggagcagaagcttgaccaaatcgcc
gagggtgacgtgatgtggaaagatgtcctagacaacttcttcacagactttacgggcgat
cttgagaaagcggaacaagacgaaaacgaaggcggcatgaaactgaatcacattgtgatg
acagatatcgagtgtccaacttgtggtcgtccaatgggtattcgtaccgcgtctaccggt
gtgttccttggctgttctggttacgcattgccacctaaagagcgttgtaagacaaccatc
aacctaggtgacgaagaaggcatcatcaacgttctagaagaagacgtggaaaccgcggca
ctacgtgctaagaagcgttgtcctatctgtgaaacagcgatggatgcgtacctgattgac
gataaacgcaagatgcacgtttgtggtaacaacccgaactgtgaaggctacatcgttgag
tatggcgagttcaaagtgaaaggctacgatggtccagttgttgagtgtgacaagtgtggc
tctgacatggttcttaagaacggtcgcttcggtaaatacatggattgtacgagtgaaacg
tgtaagaacactcgtaagattctgaagaatggcgaagttgcgcctccgaaggaagaccca
gttcatttccctgaactaccatgtgaaaactcagacgcttactttgttcttcgtgatggt
gcttctggcctattcatggcggcaagtaacttccctaaatcacgtgagacgcgtgcgcca
ttggtttctgaactggctcgatttgaagagcgtcttccagagaagttcaaatacctaacg
acagcaccagcggcggatccagatggtcgcccagcagtggttcgttttagccgtaagagc
aaagagaactacgtgcgtactgaagatgatggcaaaccaagtggttggactgcgctattc
attgacggtaagtgggaaatcacagacaagcgcaagaaaccgaaagcgaaagcttaa
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