Vibrio owensii: A9237_03560
Help
Entry
A9237_03560 CDS
T04844
Name
(GenBank) GGDEF domain-containing protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vow
Vibrio owensii
Pathway
vow05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A9237_03560
Enzymes [BR:
vow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
A9237_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Lig_chan-Glu_bd
STAR_dimer
BD_b_sandwich
Motif
Other DBs
NCBI-ProteinID:
AQW57254
LinkDB
All DBs
Position
1:complement(828318..830315)
Genome browser
AA seq
665 aa
AA seq
DB search
MVKVVQRLLVFACFLLSLSLKAEPEQVSHYKVATEADDVVTRVLFDAVAENFGVSIQYVN
YSSFDAILDSVAHGKSDFAANITYTPERAKLFSYSRPTNIEYTYLYGLSDTILSDATVVG
VPQDTIYEALLEQYYPELIQVPYQGHEEAVSLLRSRQVDGVVDAINQLKPMLLEGFDAKL
LNDHISIKPVSIVSQKGTHLEELSRFADFIHSEAVQKLLREKVALYQFELRQTALRESIK
QLPIDLEKPFTIKFESIFPYVVYKEDGSVEGMTADIVLKSCEILALNCQVISKPNESWES
MYNQFIQGEFDMLAPLTISRERRTFSHFPQPHYYPTSVMVKRLGYKPNVYSHVSQLISER
IGVVKDDFFDQMLTQMLPLKELNRFDSQQLMLDALLAREIDYIAMDTAMLNHFLRLSELI
PIEQDDAIGEFYESELSVGLATSQRGEMLAPYFSRAISMLDLEKIVAHYDLRPDWRTALE
YEVRLATQTQAVFIFVLVFALGVTLYLYRQSNTDNLTGLRNRRSLQVKYRQGVPKDLAIL
YLDINKFKQINDTYGHRAGDKVLQLLSLKIHRVWAGRSYRIGGDEFILLGYPTETQLIRA
IEELSALDVKGEHFGDLNQVTISVGVSTKRERSVSLEQALHLADENMYSSKQASRTSVEP
NPCMS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagtagttcaaaggctgttggtttttgcttgctttctattgagtctgagtctc
aaagcagaaccagaacaagtctctcattataaggtggcgacagaggcggatgatgtcgtt
acgcgtgtcctgtttgatgcggtggcagagaactttggtgtctcaattcagtatgttaat
tactcgagttttgatgcgattttagattctgtagcccatggtaaaagtgattttgccgcc
aatatcacctacaccccagaaagggcgaagctgtttagctactcgcgtcccaccaacatt
gaatacacctacctgtatggtttaagtgatacgattttgagtgatgcgaccgtcgttggt
gtcccacaagacaccatctacgaagcgctacttgaacaatattatcctgagttgattcag
gtgccttaccaagggcatgaagaggcggtatcgctgttacgttctagacaagtagacggc
gttgtcgatgccatcaatcaactcaaaccaatgttacttgaaggctttgatgccaagctg
cttaatgaccacatctcaataaagccagtatcgattgttagccaaaagggaacccacctt
gaggaactgtctcgatttgctgattttatccatagcgaagcagtgcagaaattgcttcga
gagaaggtggctttgtaccaatttgagttgagacaaaccgcattgcgtgagtctatcaag
caacttcctatcgatttagaaaagccgtttaccatcaagtttgaatctatctttccttat
gtggtgtacaaagaagatggttctgttgaaggaatgacggcagatatcgtcttgaagagt
tgcgagattttggcattgaattgccaagtgatcagcaaaccaaacgagagctgggaatct
atgtataaccagtttatccaaggtgagttcgatatgcttgctcctttaacgattagccgc
gagcgacgtacgtttagccacttccctcagcctcattactacccaacctccgtcatggtt
aagcgccttggctacaaaccaaacgtgtattctcatgtctctcagctgatttctgagcgt
attggtgtggtgaaagatgacttcttcgaccaaatgctcacacaaatgctgccattaaag
gaactcaatcgttttgattcgcagcagttgatgttggatgccttattggcgagagagatt
gattacattgcgatggatactgcaatgctcaatcacttcttacgtttgagtgagctaatt
cccatcgagcaagacgatgccattggagagttttacgaatcagaactgtcggttggctta
gcaactagccagcgcggtgagatgctcgctccttactttagccgtgcgatatccatgctg
gacttggagaagattgttgcccattacgatttgagaccggattggcgcactgcgttggaa
tatgaagtgcgcttagcaactcagacgcaagcggtgtttatttttgtgttggtgtttgcg
cttggtgtgacgttatatctgtatcgccaatcgaataccgacaacttaaccggattaaga
aatcgtcgctcgctgcaagtgaagtatcgacaaggcgtgccaaaagacttggctatcttg
tacctcgacatcaataagtttaagcaaatcaacgatacctatgggcacagagcaggggat
aaagtgctgcaattgctttcgctaaagatacatcgcgtatgggcaggtagaagttatcgt
attggtggtgatgagttcatcctgctgggttacccaacagaaacacagttaataagagcg
attgaagagctaagcgcccttgatgtcaaaggtgaacattttggtgatttgaatcaggta
acgatttctgtcggcgtgtcgactaagcgcgagcgcagcgttagcttagagcaagcattg
catttagcggatgagaacatgtactcaagtaagcaagcctctcgcacaagcgttgagcca
aacccttgcatgagttga
DBGET
integrated database retrieval system
