Vibrio owensii: A9237_05815
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Entry
A9237_05815 CDS
T04844
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K20919
sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
Organism
vow
Vibrio owensii
Pathway
vow05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A9237_05815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vow03000
]
A9237_05815
Transcription factors [BR:
vow03000
]
Prokaryotic type
Helix-turn-helix
Other families
A9237_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsR
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_16
AAA_2
AAA
AAA_5
HTH_7
HTH_29
HTH_50
AAA_22
HTH_22
HTH_17
MKT1_C
HTH_Tnp_1_2
AAA_13
HTH_IclR
LacI
TIP49
HTH_30
TrmB
DUF134
RWP-RK
HTH_23
Tecti-min-caps
Motif
Other DBs
NCBI-ProteinID:
AQW57652
UniProt:
A0AAP9GDN8
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All DBs
Position
1:complement(1305495..1306829)
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AA seq
444 aa
AA seq
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MAGQFKMDSIPGSLVVVGGTYEPWLSVLEQVGWKCHQVGDLRKANTLLEDIGPCIGIVDL
SHDEFSLNGLANLVSSHKHVRWLAFIRESQLGTDTICQFIVNFCIDFFTAPIPDAQLLST
IGHQLGMLKLEKKVWPSFGNSLDMGLIGESIPMKRLRDQVKRIGPTDVSILIYGESGTGK
EAVARAIHKVSSRSHKPFLSINCRALNEQRFQAEVFGIQADEDMGQSLLEQADGGTVLFN
DILTISKEQQMNLLRFLQEGTIETRDGAKNVNVRVLAANSSDVEKALIDGDFNEELYHYI
NVLRINVPSLKERASDIGMLARFYLQEFSKEYNSQAKSFSEDALKSLTRYFWPGNVRELM
NQVKRAVLMSDSVLIEEHHLDLPQRNDSKRSLKSIREKSERDALLVVLESHSGQVSNAAK
ELGVSRATMYRLLNKHNLISDQTV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcagtttaagatggattccattccgggatcgctagtcgtagttggcggtact
tatgaaccttggttatcagtactagaacaagtgggatggaagtgtcaccaagtgggtgac
ttacgtaaagccaacacattgttagaagatattggaccatgcatcggtatagttgacctc
agccatgatgagttcagccttaatggtttagcaaatttagtgagttctcataaacacgtg
cgctggttagcgttcatccgagaatctcaactcggaactgataccatctgtcagttcatc
gtgaacttctgtatcgacttctttactgcgccaatcccagatgcgcaactactcagcacc
attggtcaccaattgggtatgctgaaactagagaagaaagtatggccgagctttggtaac
agcctagatatggggctgattggcgaatctatcccaatgaaacgcctgcgtgaccaagta
aagcgtatcggtccaacggatgtgagtatccttatctatggcgagagtggcacaggaaaa
gaagctgtcgctcgtgcaattcacaaagtgtcgtcacgttcgcataagccgttcttgtca
atcaactgtcgtgcgcttaatgaacaacgcttccaagcggaagtgtttggtattcaagcc
gatgaggacatgggccaaagcctgcttgagcaagcggatggcggtacggttcttttcaat
gacatcctaaccatttcaaaagaacagcagatgaacctgctacgtttcttgcaagaaggc
acaattgaaactcgtgatggtgcgaagaacgttaatgttcgtgttcttgctgctaactct
tcagacgttgaaaaggcgctgattgatggtgactttaacgaagagctttaccattacatc
aatgtgctgcgcatcaacgtaccgagcctaaaagaaagagcaagcgacatcggcatgctg
gcacgtttctatcttcaagagttttcaaaagagtacaactcgcaagctaagagcttttct
gaagacgctttgaaatcgctgactcgttacttctggccaggtaacgtacgagagttgatg
aaccaagtgaaacgtgcggttttgatgtctgatagcgtactgattgaagagcatcattta
gatcttcctcaacgaaatgactcgaaacgtagcttgaagtctattcgtgaaaagagcgaa
agagatgcgttactggtggtgttagagtcgcactcaggtcaggtctctaacgcagcaaaa
gagctcggtgtatcacgtgcaaccatgtatcgactgctgaataaacacaatttgatttca
gaccaaacggtttaa
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