KEGG   Vibrio owensii: A9237_07560
Entry
A9237_07560       CDS       T04844                                 
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vow  Vibrio owensii
Pathway
vow03070  Bacterial secretion system
vow05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vow00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A9237_07560
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    A9237_07560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vow02044]
    A9237_07560
Secretion system [BR:vow02044]
 Type II secretion system
  General secretion pathway protein
   A9237_07560
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom DUF4264
Other DBs
NCBI-ProteinID: AQW57986
UniProt: A0AAU9Q836
LinkDB
Position
1:complement(1681003..1683048)
AA seq 681 aa
MKHWFSKSAWLLAGTLLCAPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDNGVLKVIKSKDSKTSAIPVLGDDSAKG
DSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDKEIEVVELRNASASEMVRIVDALNKTTNQKSTPEFLEPKIVADERTNSILISG
DPKVRARLKRLIRQLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQKGA
SNAQRGEVVIAAHEATNSLVLTAPPDIMMALQDVISQLDIRRAQVLIEALIVEMSEGDGI
NLGVQWGNLETGAVIQYGNTGAQIGNVMVGLEEAKDTTKEESYWNANGGEDGTGGFETRR
YTEEGDYSTLAAALGGVNGAAMSIMMGDWTALITAVSSDSNSNILSSPSITVMDNGEASF
IVGEEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGA
NGAVDVRFAKRQLNTSVMIQDGQMLVLGGLVDERALESESKVPLLGDIPVIGQLFKSTST
QTEKRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAQEGLKLMDDSNIPVIPEFG
QDRKHPAEIQAFIDQMVKNNG
NT seq 2046 nt   +upstreamnt  +downstreamnt
gtgaaacattggtttagcaaaagtgcttggttacttgcagggacactactctgcgctccg
ggtgcgatggcgaacgagtttagtgcaagtttcaaaggcactgacattcaagaattcatc
aacattgtaggtcgtaacttagagaagaccatcattgttgacccgtctgtacgcggcaag
atcgacgtgcgcagctatgacgttttaaacgaagagcaatactacagcttctttttaaac
gtactagaggtttacggttacgctgttgttgaaatggataacggtgtactaaaagtcatc
aaatcgaaagattcaaaaacttctgcaattcctgttttgggtgatgacagtgcaaaaggc
gacagcgtgattacacgtgtagttgcggtgcgtaacgtatcggttcgtgaactttctcca
ctactgcgccaactgattgataacgcaggtgcgggtaacgtggtgcactacgatccagcc
aacatcatcttgatcaccggccgtgctgcggtcgtaaatcgtttggctgaaatcatcaaa
cgtgttgaccaagcgggtgataaagaaattgaagtcgtagagctgagaaatgcttctgcg
tctgaaatggtgcgtattgttgacgctctgaacaaaacgaccaatcaaaagagcacgcct
gaattccttgagccaaaaatcgttgcggatgagcgtaccaactcaatcctgatttctggc
gaccctaaagttcgcgcgcgcttgaaacgtttgattcgccaacttgacgtagaaatggca
accaaaggtaataaccgcgtggtttacctgaagtatgcgaaagcagaagacctagttgat
gtactaaaaggtgtatctgacaacctacaagcggaaaagcaagcgggtcaaaaaggcgca
tcaaatgcgcaacgtggagaagtggtgatcgcagctcacgaagcgactaactcgctagtt
ttgactgctccgccagatatcatgatggcgctgcaagatgtgatttctcaactggatatc
cgtcgtgcacaggttctgattgaagcacttatcgttgaaatgtcagaaggtgacggcatc
aaccttggtgttcaatggggtaacctagaaacaggtgcggtaatccaatacggcaacact
ggtgcgcaaattggtaacgtaatggttggtcttgaagaagcaaaagatacaactaaagaa
gagagttactggaatgcaaacggcggtgaggatggaactggtggtttcgaaactcgtcgc
tataccgaggaaggtgactattcgactctagcggcagcacttggtggtgttaacggcgca
gcaatgagcatcatgatgggtgactggacagcattgattactgctgtatcatcggattca
aattcaaacattctgtcttctccaagcattacagtgatggataacggtgaagcgtcgttc
atcgttggtgaagaagtaccggtaattacaggctcgactgcaggctcgaacaatgacaac
ccattccaaacggttgaccgtaaagaagtcggtatcaaactgaaagtcgtgcctcaaatc
aacgaaggcgactcagttcagctgaatatcgaacaagaagtgtctaacgttctaggtgca
aatggtgcggttgacgtacgttttgctaagcgtcagctaaacacctctgtgatgatccaa
gatggtcaaatgctggttcttggtggcttggttgatgagcgtgcactagaaagtgaatca
aaagtgccactattgggtgatatccctgtgattggtcaattgttcaagtcaaccagcacg
caaactgagaagcgtaacctgatggtattcatcaagccaaccatcatccgcgatggtatg
acggcagatggtattactcagcgtaaatacaacttcattcgtgcggagcagctttacaaa
gcacaagaaggcttgaagttgatggatgactcaaatatcccagtgattcctgagtttggc
caagatcgtaagcatcctgctgaaatccaagcgttcattgatcagatggtaaagaataat
ggttga

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