KEGG   Vibrio owensii: A9237_08575
Entry
A9237_08575       CDS       T04844                                 
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
vow  Vibrio owensii
Pathway
vow03420  Nucleotide excision repair
vow03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A9237_08575
   03430 Mismatch repair
    A9237_08575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vow03400]
    A9237_08575
Enzymes [BR:vow01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A9237_08575
DNA repair and recombination proteins [BR:vow03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A9237_08575
   MMR (mismatch excision repair)
    Other MMR factors
     A9237_08575
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_12 AAA_11 HTH_32
Other DBs
NCBI-ProteinID: AQW58160
UniProt: A0AAP9G8D8
LinkDB
Position
1:1894019..1896193
AA seq 724 aa
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQSSPFSIMS
VTFTNKAAAEMRGRIEELMMGSAGGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
QRLLKRLIKAQNLDEKQWPARQVAWWINGKKDEGLRPSHIDAYHDPVTKTYLQLYTAYQE
ACDRAGLVDFAEILLRAHELLRDNKFVREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
ECHVMIVGDDDQSIYGWRGAKVENIEKFTLEFPSVNTIRLEQNYRSTKTILEASNALIAN
NTERMGKELWTDGVVGEPISIYSAYNELDEARFAVNKIKEWQDKGGALNDAAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYMRLIANRNDDAAFERVVNTPTRGLG
DKTLETIRFAARDRGCTMWEASVAMLDEKVLAGRAAGALSRFIELVTALEDDTIEMPLHH
QTDHVIKYSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEDMSLLTAFLTHAA
LEAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRF
SQTAVKESFNETGFTLGSRVMHPKFGEGTIINFEGSGPQSRVQIAFNGEGIKWLVTAYAR
LEKL
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgatggatccatctctattactcgacggtttgaacgacaaacaacgtgaagccgttgca
gcacctctagaaaacttgctcgtccttgctggtgcagggagtggtaagacacgcgttctt
gttcaccgtatcgcttggttgatgtcggtcgagcaatcatctccgttctcaatcatgtcg
gtaacctttaccaataaggcggcggcagagatgcgtggacgtatcgaagagctaatgatg
ggcagtgcaggcggtatgtggaatggtactttccacggcatttgtcaccgtattctgcgt
gcgcactatcttgatgccaagctaccggaagatttccaaatcatcgatagtgacgaccaa
cagcgtctactaaagcgtttgatcaaagcgcaaaacctcgatgagaagcagtggccagca
cgccaagtggcatggtggattaacggcaagaaagacgaaggtctgcgtccgtcgcacatt
gatgcgtaccacgatccagtgaccaagacatatctgcagctttacaccgcttatcaagag
gcgtgtgatcgtgctggtttagtcgattttgcggaaatcttgctgcgcgcacatgagcta
ctgcgtgataacaagttcgtccgtgaacactaccaagcacgctttaagcatatcttggtg
gacgaattccaagataccaacaacattcaatatgcttggctacgtatgatggcgggtcct
gagtgtcacgtgatgatcgtaggtgatgacgatcagtcgatttacggctggcgtggtgca
aaagtcgaaaacattgagaaatttacgctggaattcccaagcgtgaataccattcgtctt
gaacaaaactaccgttcaaccaagaccattctggaagcgtccaacgctctgatcgcgaat
aacaccgagcgtatgggtaaagagctttggactgatggcgttgtcggtgagcctatctcg
atttatagcgcttacaacgaactagacgaagcccgttttgcggtaaacaaaatcaaagag
tggcaagacaagggcggtgctctgaatgacgctgcaatgctttaccgaaataacgcccag
tcgcgtgttcttgaagaagcactaatccaagcaggtctgccttaccgtatctacggcggc
atgcgattcttcgaacgtcaggaaatcaaagatgccttgagctacatgcgtctgattgca
aaccgtaatgatgatgcggcatttgaacgtgtagtgaatacgccaacgcgtggtttgggt
gataagacgcttgaaaccatccgttttgcggctcgtgaccgtggttgcaccatgtgggaa
gcgagtgtggctatgttggatgagaaggtgcttgcaggtcgtgctgctggtgctctgagc
cgttttatcgagcttgttacggcactagaagacgacaccatcgagatgccgctgcatcac
caaactgaccatgtcatcaaatactctggcttgttcgcgatgtacgagcaagagaagggc
gaaaagtctaaggcacgtattgagaacttggaggaattggtgactgcaactcgccaattc
gagaaaccagaagaagctgaagacatgtcactgctgacggcattcctaacccacgcggca
ctagaagcgggcgaaggacaagcggacgagtttgaagatgcggttcagctcatgacattg
cacagtgcgaaaggtctagagttcccgttggtgtttatggttggtgtggaagaaggcatg
ttcccaagccaaatgtcggcagaagaagcagggcgtttagaagaagaacgtcgtctgtgt
tacgtaggcatgacccgtgcgatgcagaaactgtacatcacttatgctgaaatgcgccgt
ttgtacggtcaggataagtaccataaaccgtctcgctttatccgtgaactgccagaaact
tgtctagatgaagtacgcatgaaggcgcaagttagccgtcctgcaagcagcggtcgattt
agccaaacggcagtgaaagagagcttcaatgaaactggctttacgctaggttctcgtgtg
atgcatcctaagtttggtgaaggcaccatcatcaacttcgaaggcagtggtccacagagc
cgcgtacagattgcctttaatggtgagggcatcaaatggttggtgactgcttacgctcga
ctagagaaactgtaa

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