Vibrio owensii: A9237_08640
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Entry
A9237_08640 CDS
T04844
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vow
Vibrio owensii
Pathway
vow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9237_08640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vow03021
]
A9237_08640
03019 Messenger RNA biogenesis [BR:
vow03019
]
A9237_08640
Transcription machinery [BR:
vow03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A9237_08640
Messenger RNA biogenesis [BR:
vow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A9237_08640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
AAA
S1CSD-TOTE-2
FtsK_SpoIIIE
TP_0747_N
Motif
Other DBs
NCBI-ProteinID:
AQW59610
UniProt:
A0AAP9GF42
LinkDB
All DBs
Position
1:1910164..1911423
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNRPVSDLVKLGESLGLENLARLRKQDIIFAILKAHAKGGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKDGERYFALLKVNTVN
DDKPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPECELMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTILATALVDTGSKMDEVIYEEFKGTGNMEIHLNRKIAEKRVFPAIDF
NRSGTRREELLTKNEELQKMWILRKIVHPMGEIDAMEFLIDKLAMTKTNDEFFDAMRRQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttactgaactgaagaacagacctgtgtctgaccttgtaaagcttggcgaaagc
ctgggtcttgagaacctagctcgtctaagaaaacaagacatcatcttcgcaattcttaaa
gcgcacgcaaaaggcggcgaagacatctttggcgatggggttctggagattctgcaagac
ggctttggtttcctacgtagcgcggacagctcataccttgctggtccagacgatatctac
gtttcgccaagtcagattcgtcgcttcaacctacgtactggtgactcaattgctggtaag
attcgcccaccaaaagacggtgagcgctactttgccctgctaaaagtcaacacagttaac
gacgacaaaccagacaacgctcgtaacaagatcctattcgagaacttaacgcctctgcac
gctaacgagcgtatggtaatggagcgcggtaacggttctacagaagacatcacagcacgt
gttttagacttggcatcgccaattggtaaaggtcaacgtggtctgattgttgctccgcct
aaagcgggtaagacaatgcttctgcaaaacatcgctcaaagcatcgcatacaaccaccca
gagtgtgagttgatggtacttcttatcgacgaacgtccagaagaagtaacagagatgcag
cgtctagttaaaggtgaagtagtggcgtcaacattcgatgagccagcttctcgccacgta
caagtagcggaaatggtaatcgagaaagcaaaacgtcttgttgaacacaagaaagacgtg
gttatcctgcttgactctatcactcgtctagctcgtgcatacaacaccgtagtaccttca
tcaggtaaagtgttaactggtggtgtggatgcaaacgcactacaccgtcctaagcgtttc
ttcggtgcagcacgtaacgtagaagaaggtggcagcctaactatccttgctactgctcta
gttgatactggttctaagatggacgaagttatctacgaagagttcaagggtacaggtaac
atggaaatccacttgaaccgtaagatcgcagagaagcgtgtattcccagcgattgacttc
aaccgcagtggcacacgtcgtgaagagcttctaactaagaacgaagagcttcagaagatg
tggattctacgtaagattgttcacccaatgggcgaaatcgatgcaatggaattcctaatc
gacaagctagcgatgacgaagaccaacgacgaattctttgatgcaatgcgtcgtcagtag
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