Vibrio owensii: A9237_10215
Help
Entry
A9237_10215 CDS
T04844
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
vow
Vibrio owensii
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vow03019
]
A9237_10215
Messenger RNA biogenesis [BR:
vow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A9237_10215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Phenol_Hydrox
Motif
Other DBs
NCBI-ProteinID:
AQW58419
LinkDB
All DBs
Position
1:2237930..2239939
Genome browser
AA seq
669 aa
AA seq
DB search
MRYTPTLKLSTRLVAFVTMIVICAMFILFVGGTLSFKRLGQEYLNHYLEGIVEVVDKEME
DPDAAYSMQRWMPKMLQASNIVEMTLSTNNAVVYRFKDTSHKMDNSVLFEHEYQLNHNQD
YTIYFKAIPPYLGYGYSMQALWSITLAVILIIFCLMRGVKWLKEQLAGSEMLEERGRMIL
AGRVEQYAKGDEREWPYTASEALDVLIEELQDARQERSRFDTFIRTQTFLDKLTGTANRV
LFDSKLESALLESGARGSVMLIRIQDWKSVEEEQDKQTCDEFIVEVGSLLSNLVQRYPDV
VFSRYYNADFALFLPHQAAKDVANLASQCIRQLEKLHPPYPLDSDNWCHIGITMYKEGER
HSQIIDEAETALRSAQLQNNNNWSRFKKWNHDEEARGSVRWRTLFDSALTSENVILYAQS
AYSISDVAHKKPLHEELTCRIRDPENGIVKASRFISAVRQVGYEAQMDRAVVHKFLKDFK
HSFDSSKCYVVNLHVVPFGHREYFKWFRDELLQLSREQRKCLIFEFVEAQFVRHLDFMRP
VAKMLAGLECHVMIGQAGRTIVSTHYLKEVDIRYLKLHRSLVTKIDQRHENQLFVRSMLG
AAANSKTKIIAVGIENKHELNTLNELGVHGGQGRYFSPAEQYLPRSKPTVISQSESQVKL
GRRNRWRKK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaggtataccccaactcttaagctaagcacgcggctggtggcctttgtcaccatgatc
gttatttgcgcaatgtttatcttgtttgtcggtggcaccctctctttcaaacgactagga
caagagtatctcaaccattatttggaagggatcgtagaagttgttgataaagagatggag
gatcctgacgcagcgtattcgatgcaacgttggatgccaaagatgctgcaagcaagcaac
attgttgaaatgacgctctcaaccaacaatgctgtggtttatcgcttcaaagatacttcc
cataagatggataattccgttttgtttgagcacgagtatcagctcaatcataaccaagat
tacaccatctacttcaaagccattcctccgtatttaggctacggctattcgatgcaagca
ctttggtcgatcacgctagcggtcattttgatcattttctgtttaatgcgtggtgttaaa
tggctcaaagagcaactcgcgggatcggaaatgcttgaagaacgtggacgcatgatcctc
gctgggcgagtcgaacagtacgccaaaggtgatgagcgagaatggccatatacagccagt
gaagcgctagatgtattgatcgaagagcttcaagatgcgcgccaagagcgtagccgcttt
gatacctttattcgtactcaaacctttcttgataagctcactggtactgcaaatcgtgtg
ctgtttgatagcaagcttgaatctgctttgttggaaagtggtgctcgtggttcagtgatg
ctgattcgtatccaagattggaagtctgttgaagaagagcaagataaacaaacttgtgat
gagtttattgttgaagtgggcagtttgctttcaaacttggttcagcgttatcccgatgtt
gtgttctcacgctactacaatgctgattttgccctgttcttacctcatcaagcggcaaaa
gatgtcgcaaacttggcgtctcaatgtattcgccaattagaaaagcttcatccgccttac
cctctcgattctgacaactggtgtcatatcggtatcaccatgtacaaagagggcgaacgt
catagccaaatcattgatgaagctgaaaccgcattgcgtagtgctcagttacagaataat
aacaactggagtcgttttaagaagtggaaccacgacgaagaagctcgcggtagtgtgaga
tggcgtacgctatttgactcagcactcacatctgaaaatgtgatactctacgcacaatcg
gcctattcaataagtgatgtggcgcataaaaaaccattacatgaagagttaacatgtcgg
attcgcgatccggaaaatggcattgttaaagcgtctcgctttatttctgctgttcgacaa
gttggctatgaagcacaaatggatcgtgctgttgttcataaattcttaaaagattttaaa
catagctttgatagttccaagtgttatgtcgttaatctgcatgttgtgccttttggccat
cgagaatacttcaaatggttccgtgatgaactcttacagttgtcacgtgagcaaagaaag
tgtctcatttttgagtttgtggaagcacaatttgtaagacacttagactttatgcgacca
gtcgctaaaatgctggccggtttagaatgtcacgtcatgattgggcaagcgggacgcacg
atcgttagcacccattatttaaaagaagtagacattcgttaccttaagcttcatcgcagc
ttggtaacaaaaatcgatcagagacatgagaaccagctgtttgttcgcagtatgttgggt
gcggccgcaaacagtaaaacaaaaataatagcagtgggaattgagaataagcacgaattg
aacaccctgaatgaattaggggttcatggcgggcagggacgttatttctctccagcagag
cagtatctacctagatccaaaccaacggtcatttctcaatctgaatctcaagtaaaattg
ggacgcagaaatcgctggcgaaaaaaataa
DBGET
integrated database retrieval system
