Vibrio owensii: A9237_10345
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Entry
A9237_10345 CDS
T04844
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vow
Vibrio owensii
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vow03021
]
A9237_10345
Transcription machinery [BR:
vow03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A9237_10345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
COG2_N
RelB-like
WWE
Motif
Other DBs
NCBI-ProteinID:
AQW58444
LinkDB
All DBs
Position
1:2270008..2272917
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAIVLREIFLSNHIRFNKPQDKLYAGQI
DRMDNFVLRYRALQNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLAGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
EAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTAGVLLLTATPEQLGRESHFARLRLLDPDRFYDYDAFVEEEEQYAPVADAITSLF
SGEKLPDEAKNQITELLSEQDVEPLFRIIESDSDEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPKRNVHLMPMDIPQQYTTSMRVSGMIGGKMTPEARAVKNLYPEEIFQEFE
GEDSSWWQFDSRVNWLLEKVKEKRSDKVLVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQKRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEMLASGD
VSNLDEVIEESAKMNKELKSQLEQGRDRLLEMHSNGGDKAQQIVEKIASTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELVYAVDAQAPKRSGIARFLPKT
PIRMMMDARGNDLSSQVEFEGFNRQLSPVNRHLGSKLVTSVQKDIHSLIEAGDALVEQKV
EEVRKQAHQDMQQSLNAELERLQALKAVNPNIRDEEIEAIEEQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgtagtagcaatggatgctcgtactgtgacattgatgtttgcagcatcagaggaaaac
cgagtttacgcacgtaacgatgcaccagttacccgagtaacgttcaacgtcggtgatgtc
atcgattgccaagaaggttggtcattaaaagttgaagaagtactggaagacgaaggtcta
tacacctatttcggtactcgtgaagacacgcaagaaacggcgatcgtgctgcgtgaaatc
ttcctaagcaaccacattcgttttaacaaaccgcaagacaagttgtacgcaggtcaaatc
gaccgcatggacaacttcgtacttcgctaccgtgcgctacaaaaccaatttgaacagcac
aagagcccaatgcgtggcctgtgtggtatgcgcgcaggtttgatccctcaccagctttac
atcgcgcacgaagtcggtcgccgtcacgcgcctcgcgtattgctagcggatgaagtaggt
cttggtaaaaccatcgaagcgggcatgatcatccaccagcaagtactggcgggtcgtgcc
gagcgtattcttatcgtggttcctgagacactgcaacaccagtggctcgttgagatgatg
cgtcgtttcaacctgcacttctctatcttcgatgaagagcgctgtattgaagcttttgca
gaagcagaaaacccatttgatacgcagcaatatgtactgtgttcgctggatttcctacgt
aagagccgtaagcgttttgagcaagcgctagaaggcgaatgggatctattggttgtcgat
gaagcgcatcacctagagtggagccaagacaaaccaagccgcgaataccaagtggtagaa
ggcttggcagaacgcactgcgggtgtacttctactgacagcaacaccagaacaacttggt
cgtgagagccacttcgctcgtctacgtctgctagatccagatcgtttctacgattacgac
gcattcgttgaagaagaagagcaatacgcacctgttgcggatgcgatcacgtcgctattc
tctggtgagaaactgcctgatgaagcgaaaaaccaaattactgaactgctttctgaacaa
gacgttgagccgctattccgcattatcgaaagcgacagtgatgaagaagcgaaagcgtca
gcgcgccaagaactgatcgacaacctaatggaccgtcacggtactggccgcgttctgttc
cgtaacacgcgtgcagctatcaaaggcttcccgaagcgtaacgtacatctaatgccaatg
gatattccgcagcagtacaccacgtcaatgcgtgtatcaggcatgatcggtggcaagatg
acgccagaagctcgtgcggtgaagaacctttacccagaagaaatcttccaagagtttgaa
ggtgaagattcaagctggtggcagttcgactcacgtgtgaactggctacttgaaaaagta
aaagagaagcgcagcgacaaagtgttggttatcgcttctcgtgcaagcactgcgctgcaa
cttgagcaggcactgcgtgagcgtgaaggtattcgtgcaactgtattccacgaaggcatg
tcgatccttgagcgtgacaaagcggctgcttactttgcacaagaagagggcggcgcgcag
gttcttatctgtagcgaaatcggctcagaaggtcgtaacttccagtttgctaaccaactt
gtgatgttcgatttgccgttcaacccagacttgctagagcaacgtattggtcgtctggac
cgtatcggtcagaagcgtgatatcgacattcacgtcccatacctaaaaggcacatcacaa
gccatccttgcgcgttggttcgatgaaggtctaaatgcgtttgctgaaacctgtccaaca
ggtcgcgcggtttacgataagtactcggatgcgctgattgaaatgctggcgtctggcgat
gtttcaaaccttgatgaagtgattgaagaatcagcgaagatgaacaaagagctgaaatca
caacttgagcaaggtcgtgaccgcctgctagagatgcactcaaatggcggcgacaaagcg
cagcaaatcgttgagaaaattgcatcgacagatggcgacacaaacctagtgacattcgcg
ttgtctctgttcgacactattggtttgaaccaagacgacaaaggcgaaaacgcgcttgtg
gtaacgccatctgaacacatgatggtaccaagctacccaggcttgccttacgaaggcgcg
acaatcacgtttgaccgtgatactgcgctgtctcgtgaagacatgcacttcatcagttgg
gagcacccaatgattcaaggcggtatcgatttgctgatgagcgaaggcgtgggtacctct
gcggtttctctactgaagaacaaagcgctacctgtgggcactatcctacttgaactggta
tacgcggtggatgcacaagcaccgaaacgcagcggcattgctcgtttcctaccgaagacg
ccaattcgcatgatgatggatgctcgtggtaacgatctgtcttctcaggttgagtttgaa
ggttttaaccgtcagcttagcccggtaaaccgtcacctaggcagcaagctagtgacatca
gtacagaaagacattcacagcctaatcgaagcgggtgacgcattggttgagcagaaagtg
gaagaagttcgcaagcaagcgcatcaagacatgcaacaaagcttgaatgcagagcttgag
cgtctacaagcactgaaagcggttaacccgaacatccgtgatgaagaaatcgaagcgatt
gaagagcaaatcaaagagctaacaggttacatcaaccaagctcaggttcagctagactcg
ctacgtctgattgtggtcagccacaactaa
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