Vibrio owensii: A9237_11075
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Entry
A9237_11075 CDS
T04844
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vow
Vibrio owensii
Pathway
vow05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A9237_11075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vow03021
]
A9237_11075
Transcription machinery [BR:
vow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9237_11075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AQW58563
UniProt:
A0AAU9Q172
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All DBs
Position
1:2399701..2400684
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AA seq
327 aa
AA seq
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MSISNTVTKVEEFDYDNAQSEGISNEPAKTSTGTKSAAREEFDASSKSLDATQLYLGEIG
FSPLLTAEEEVLYARRALRGDEAARKRMIESNLRLVVKISRRYSNRGLALLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRTARELS
QKLDHEPTAEEIAAQLDIPVEDVSKMLRLNERISSVDTPIGGDGEKALLDIIPDANNSDP
EVSTQDDDIKSSLIHWLEELNPKQKEVLARRFGLLGYEPSTLEEVGREIGLTRERVRQIQ
VEGLRRLREILIKQGLNMENLFNVEDD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagcaacacagtaaccaaagttgaagagttcgactacgataatgcacaatcg
gaaggcatttcaaacgaacctgcaaaaacatctactggaaccaaatcagcggcgcgcgaa
gaatttgacgcgagcagtaagagcttagatgcaacacagctctacttgggcgaaattggt
ttctcaccactactcactgcagaagaagaagtactttatgctcgacgtgcgctgcgtggc
gatgaagctgctcgcaaacgtatgatcgaaagtaacttgcgtcttgtagtgaagatctct
cgtcgatacagtaaccgtggtcttgcacttcttgatctcatcgaagaaggtaacctaggt
ttgatccgtgcggtcgagaagttcgatccagaacgcggtttccgtttttcaacttacgcg
acgtggtggattcgccaaacgatcgaacgtgcgttgatgaaccaaactcgtacgatccgt
ctgccaattcatgtggttaaagagctgaacatttatctgcgtacagcgcgtgaactttct
cagaagctcgaccatgaaccaacagcggaagagatcgctgcacagttagatatcccagta
gaagacgtaagtaaaatgcttcgcctcaacgagcgcatcagttctgttgacacaccaatc
ggtggtgacggcgagaaagcgctattggatatcattcctgatgcaaacaactcggatcct
gaagtttccactcaggacgatgacatcaaatcttcattgatccattggctagaagagctg
aatccaaaacagaaagaagtgctggcacgtcgttttggtctgcttggttatgagccatcg
acgcttgaagaagtgggacgtgaaatcggactaacgcgtgaacgtgttcgtcagatccaa
gttgaaggtttacgtcgactacgcgagatcttgattaagcaaggtttaaacatggaaaac
ctgtttaacgttgaagacgactaa
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