Vibrio owensii: A9237_11660
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Entry
A9237_11660 CDS
T04844
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vow
Vibrio owensii
Pathway
vow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9237_11660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vow03019
]
A9237_11660
03016 Transfer RNA biogenesis [BR:
vow03016
]
A9237_11660
Enzymes [BR:
vow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A9237_11660
Messenger RNA biogenesis [BR:
vow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A9237_11660
Transfer RNA biogenesis [BR:
vow03016
]
Prokaryotic type
tRNA degradation factors
A9237_11660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
S1_TP0910
KH-I_KHDC4-BBP
DUF3016
KH_SLS1_2
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
AQW58664
UniProt:
A0AAP9G9Z6
LinkDB
All DBs
Position
1:2528797..2530929
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AA seq
710 aa
AA seq
DB search
MFEKPVVKTFQYGNHTVTLETGVIARQATAAVMVTMDDTAVFVSVVGKKEAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPDAFKNEVQVIATVVS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSNTELEASKLDLVV
AGTESAVLMVESEADNLTEEEMLSAVVYGHDQQQTVINAINEFAAEVATPAWDWVAPEEN
TALVNKIAELAEAKLVEAYQITEKMARYDRIHEIAGEVNEVLLAEDPEANTKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDELTGERKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNTGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDE
AISGAREDISEFAPRIHTMKISAEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TEGAAAKEAIRRIEEITAEVEVGRIYTGKVARLADFGAFVTVLPGKDGLVHISQIAEKRV
EKVSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVEKPAEEANDASEAKGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaccagttgttaaaacgttccagtacggtaaccacacagttactctagaa
actggcgttatcgcacgtcaagctacggcagccgttatggtaactatggacgatacagca
gtattcgtttctgtagttggtaaaaaagaagcagttgaaggtcaagacttcttcccgcta
acagttaactaccaagagcgtacttacgctgcaggtaaaatccctggtggtttcttcaag
cgtgaaggtcgtccatctgaaggtgaaacgctaacggctcgtctaatcgaccgtccaatc
cgtccacttttcccagatgcattcaaaaacgaagtacaagttatcgcaacggtagtatct
gttaacccagatgttcaacctgatatcgtaactatgatcggtacttctgcggcgctagct
atctctggtattccgttcaacggtcctatcggtgctgcacgtgttggtcacatcgacggt
caactagtacttaacccaagcaacacagagctagaagcttctaagctagacctagtggtt
gcgggtactgaatctgcagtactaatggttgagtcagaagctgacaacctaactgaagaa
gaaatgctatcagcggttgtttacggccacgaccaacaacaaacagtgatcaacgcaatc
aacgagtttgctgctgaagttgcgactcctgcttgggattgggttgctccagaagagaac
acagcacttgtaaacaagatcgctgaactggctgaagctaagcttgttgaagcttaccaa
atcactgagaagatggctcgttacgaccgcatccacgagatcgctggtgaagtaaacgaa
gtgctacttgctgaagatccagaagcgaacacaaaagaaatccacactatcttccacgat
ctagagaagacagttgtacgtcgcagcatcatcgctggtaacccacgtatcgacggccgt
gaaaaagacatggttcgtgcgctagacgtacgtactggtgttcttcctcgtacacacggt
tcatcactatttacacgtggtgaaactcaggctctagtaactgcgactctaggtacgcag
cgtgatgctcaaatcatcgacgagctaactggtgagcgtaaagatcacttcctactacac
tacaacttccctccatactgtgttggtgaaactggttttgtaggttctcctaagcgtcgt
gaaatcggtcacggtaaactggctaaacgcggtatcgcagcagtaatgccttctgttgat
gaattcccatacacagtacgtgttgtatcggaaatcactgaatctaacggttcttcttca
atggcttctgtatgtggtacttctcttgctcttatggacgcaggtgtgccaatcaagtct
tctgttgcgggtatcgcaatgggtcttgttaaagaaggcgatgacttcgttgttctttct
gacatccttggtgacgaagaccacctaggtgacatggactttaaagtagcgggtactaac
actggtatcacagcacttcaaatggacatcaagatcgaaggtatcactaaagagatcatg
caaattgcgcttaaccaagctcaaggtgcacgtaagcacatcctatctgtaatggatgaa
gctatctctggtgctcgtgaagacatctctgaattcgctcctcgcattcacacaatgaag
atcagcgcagagaagatcaaagacgttatcggtaaaggtggtgcagttatccgtgctcta
actgaagagactggtacaactatcgaaatcgaagacgacggtactatcaagattgcagca
actgaaggtgcagcagcgaaagaagctatccgccgcatcgaagagatcactgctgaagtt
gaagtaggccgtatctacactggtaaggttgcacgtctagctgactttggtgcattcgta
acggttcttccaggtaaagatggtctagtacacatctctcaaatcgctgaaaaacgcgtt
gagaaagtgtctgactacctaactgaaggtcaagaagttcaagttaaagttcttgaaatc
gaccgccaaggccgtgtacgtctaagtatgaaagaagctgtagagaagccagcagaagaa
gcaaacgacgcttccgaagcaaaaggcgagtaa
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