Vibrio owensii: A9237_12525
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Entry
A9237_12525 CDS
T04844
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vow
Vibrio owensii
Pathway
vow03030
DNA replication
vow03430
Mismatch repair
vow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9237_12525
03430 Mismatch repair
A9237_12525
03440 Homologous recombination
A9237_12525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vow03032
]
A9237_12525
03400 DNA repair and recombination proteins [BR:
vow03400
]
A9237_12525
Enzymes [BR:
vow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9237_12525
DNA replication proteins [BR:
vow03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9237_12525
DNA repair and recombination proteins [BR:
vow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9237_12525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AQW58826
LinkDB
All DBs
Position
1:2727086..2730565
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRIHSDFSMVDGINKVPPLVKKVAELGMPAMALTDFTNLCGLVKYYGTAHGS
GVKPIIGADFKMQSDEFGEELTQLTLLAANNEGYKNLTLLISKAYLRGHVQHQPVLDKAW
LAELSEGLIVLSGAKNGEIGKALLKGNRKVVDSCVEFYNQYFPDRFYLELVRTGRPDEET
YLHFAIELAEEVELPVVATNEVVFISEDLFDAHEIRVAIHDGYTLEDPRRPKNYSPEQYL
RTEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMEETDFLVMKSREGL
EERLEFLFPDEEERKQRRPEYDDRLQIELDVINQMGFPGYFLIVMEFIQWSKDNAIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFKAEPA
LPELYDADEEVKELIDMCRLLEGCTRNAGKHAGGVVISPTTITDFAPIYADSEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLEREGKDPVRIESIPLDDAASFRLL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRATFEEGAIANGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKMHYPA
EFMAAVMTADMDNTEKVVGLVDECFRMKLTVLPPDINAGLYRFNVDENGAIVYGIGAIKG
VGEGPIDAILEARNKGGHFIDLFDFCARIDLKKVNKRVIEKLIYAGALDRLGPHRAALMA
SLNDAVKAASQHHQAEAFGQTDMFGVLTDAPEEVEHKYTQVPAWPEKVWLEGERETLGLY
LTGHPVNAYIKELNKYVSCRLKDATPTRRDQSVTVAGLVIAARVMTTKRGTRIGIMTLDD
RSGRMEVMLFSDALDRYAELLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGTAREKYA
RGLSVSIDASQINDKFFEQFTRILEPHKAGTVPVNVYYQRADARARLTLGTEWRVTPTDT
LLDDLKQLLGKGQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcccaagttcattcacctaagaatccacagtgatttctctatggtggatggt
atcaacaaagttccaccgctcgttaagaaagtcgccgagctcggtatgcctgcaatggcg
ctgaccgatttcaccaacctgtgtggtttggtgaaatactatggcactgcacacggtagt
ggtgtgaagccaatcatcggtgcagacttcaaaatgcaatcggatgagtttggtgaggag
ctgacgcaattaacgttacttgcagcaaacaacgaaggttataaaaacctgactttgctg
atctcaaaagcttaccttcgtggtcacgtacaacaccaaccggtgctcgacaaagcttgg
ttagctgaactatcagaaggtttgattgttctttcaggcgcgaaaaacggtgaaatcggt
aaagcattgctaaaaggcaaccgtaaagttgtcgacagttgtgtcgagttttacaaccaa
tacttcccagatcgcttctatctagaattggttcgtactggtcgtccggatgaagaaact
taccttcactttgcgattgaattggcagaagaggttgagctgccagttgtcgcaaccaac
gaagttgttttcatcagtgaagacttgtttgacgcccatgaaatccgcgttgcgatccat
gatggctacaccttagaagatccgcgtcgtccgaagaactacagtccagaacaatacctg
cgtactgaagaggaaatgtgcgagctgtttgccgacattccggaagcgttagaaaacagt
gttgaaattgccaagcgttgtaacgtgacagtacgtctcggtgaatacttccttcccgcc
ttcccaactgaaggtatggaagagaccgacttcttggtaatgaagtctcgtgaaggtctg
gaagagcgcctagagttcctgttcccagatgaggaagagcgaaaacagcgtcgtcctgaa
tacgatgatcgtctgcaaatcgaactcgacgtaatcaaccaaatgggattccctggttac
ttcttgatcgtaatggagttcatccaatggtcgaaagacaacgcgattccggtaggtccg
ggtcgtggttcaggtgccggttctttggtggcatacgcattgaagatcaccgaccttgat
ccattggaatacgaccttctattcgaacgtttcttgaaccctgaacgtgtatccatgccc
gatttcgacgtcgacttctgtatggataagcgtgaccaagtaattgatcacgtagcggaa
atgtatggccgtgatgcggtatctcagatcatcaccttcggtaccatggcggcgaaagcg
gtaatccgcgacgtaggccgtgtactgggtcacccgtttggcttcgttgatcgtatttca
aaattggttccgcctgacccgggtatgacgctggaaaaagcgttcaaagctgagcctgca
ctacctgagttgtatgacgcagacgaggaagtgaaagagcttatcgacatgtgtcgcctc
cttgaaggttgtacacgtaacgccggtaagcacgcgggtggtgttgtaatctcaccaacc
acaattacagacttcgccccgatttatgctgactcggaaggtcacttcccagttactcag
ttcgataagaacgacgttgaaaccgctggtctggttaagtttgacttcttgggtctgcgt
accttaaccatcatcgactgggcgttgggtctgattaacccgcgtctagaacgcgaaggc
aaagatcctgttcgcatcgaatcgattccactggatgatgcggcgtcattccgtttgctg
caaaactcagaaaccactgcggtattccagcttgaatcgcgcggtatgaaagagctgatt
aaacgtctgcaaccggactgttttgaagacatcatcgcattggtggcactgttccgccca
gggccgcttcagtcgggcatggtagataactttatcgaccgtaagcacggtcgtgaggcg
atctcttatcctgatgaaaagtggcaacacgaatcgcttaaagagattctggatccgact
tacggcatcatcctgtatcaagaacaggtaatgcagatcgcacaggtactgtctggctac
acccttggtggtgcggacatgcttcgtcgtgcgatgggtaagaaaaaaccggaagagatg
gcgaaacagcgtgctaccttcgaagagggggcaattgccaacggcgtcgatggcgagttg
gcgatgaagatcttcgacttggtagagaagttcgcgggttacggctttaacaaatctcac
tcggcagcctatgcactggtttcgtaccaaacgttatggctgaagatgcactatccagcg
gagttcatggcagcggtaatgaccgccgatatggataacactgagaaagtggttggccta
gtagacgaatgtttccgcatgaagctcaccgtgcttccgccagacatcaatgccggcttg
tatcgttttaacgtcgatgagaatggcgcgattgtttatggcatcggcgcgatcaaaggc
gtgggtgaaggtccaatcgatgcaatcttggaagcgcgcaacaaaggcggtcacttcatc
gacctatttgacttctgtgcgcgtatcgatctgaaaaaggtcaacaagcgtgtaatcgaa
aagctgatttacgcaggcgcactcgacaggctaggtccacatcgtgcggcattgatggca
tcactcaatgatgcggtgaaagcggcaagccaacaccaccaagcggaagcctttggtcaa
accgatatgttcggtgtattgactgatgcgccagaagaggtggaacacaaatatactcaa
gtgccagcgtggccagagaaagtatggttagagggtgaacgtgagacgcttggtttatat
ttgaccggccacccagttaacgcatacataaaggaactaaataagtacgttagttgtcga
ctaaaagacgcaaccccaactcgtcgcgatcaatccgtgacagtggcgggtctggttatt
gcagctcgcgtgatgacaaccaaacgcggtacgcgtatcggtatcatgactctggacgac
cgaagtggtcgaatggaggtgatgttgttctcggatgcgcttgataggtatgcagaactt
ctcgaaaaagataaaattctggttgtttctggacaggtcagctttgatgacttcaacggt
ggccttaaaatgtcggcgcgtgaagttatggatctgggtaccgcacgtgaaaaatacgca
cgtggtttgtcggtatctattgatgctagccagatcaacgataaattctttgagcaattt
actcgtattttagaaccgcacaaagccggaaccgtacctgtcaatgtatactaccagcgt
gccgacgccagagcgcggttaacattgggcaccgaatggcgagtaacgccaacagataca
ttactagacgatttaaaacagttgcttggcaaaggccaagtagaactcgaatttaactaa
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