Vibrio owensii: A9237_13160
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Entry
A9237_13160 CDS
T04844
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vow
Vibrio owensii
Pathway
vow05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A9237_13160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vow03000
]
A9237_13160
Transcription factors [BR:
vow03000
]
Prokaryotic type
Helix-turn-helix
LysR family
A9237_13160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AQW58946
UniProt:
A0AAP9GAG9
LinkDB
All DBs
Position
1:complement(2856575..2857450)
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTSTAEEITDDCRGASGKIKISAPYNLTKRMMMPMFNSFMKQYPDI
NIELTTESNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPDYLSANPAPNHA
EELSNHSLLKGSPLIKWTLINSKGESVVNVERGRFQANALNVVRSSCSEGLGITLMPDVM
IKEYIESGDLVRILPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatctaaacctatttcgattggttgtcgaaaatgggagctataccgca
acttcgcgaaaaaccatgattccggtggcaaccatcacccgacgcattcaagcgcttgaa
gactctgtcaatcttcgattgctgaaccgtcatgcgcgtaagctttctctgactgaagcc
ggggaacgtttttaccatgaatgctcacctttgctgcaacgcctaacctcgacagcagag
gaaattacggatgattgccgtggtgcatcgggcaagatcaagatctctgcgccgtacaac
ttgacgaagcgcatgatgatgccgatgttcaattcgttcatgaaacagtacccagatatc
aacatcgaactgacaacggaaagcaacgccgatcaacttgatcctacagagtgggacgtg
atcttccgtgttggcccgcaacgtgactccagtctgattgctcgtaaaatcggtgaagtg
aaagacattctggtcgcgagtcctgattacttgagcgcaaaccctgctccaaatcacgct
gaagagctttctaaccactctttgctaaaaggttcaccacttatcaagtggacgctgatt
aacagcaagggcgagtctgtggtgaacgtagagcgtggtcgttttcaagcaaacgcactg
aacgtggttcgtagctcttgttcggaaggtcttggcattacgttgatgcctgatgtgatg
atcaaagagtacatcgaaagtggcgatctcgtgcgcatattgccagattggagcgcaaac
ccgcgtgacatctacatgctttacaaccacaaagatcacctaccagagaaagttcgacta
ttcatcgacttcgtgatcgcctacaacattcattaa
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