Vibrio owensii: A9237_18210
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Entry
A9237_18210 CDS
T04844
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vow
Vibrio owensii
Pathway
vow05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A9237_18210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vow03000
]
A9237_18210
Transcription factors [BR:
vow03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
A9237_18210
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
HTH_40
HTH_23
Sigma70_r4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AQW59980
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All DBs
Position
2:348000..348656
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AA seq
218 aa
AA seq
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MRNIMGQYKEKPEILMITQQSLQSENFKEMLSKNTDTKITIIDSKNPSYHELIPEQYFLL
VDFSVDTPSDTLVYLKDSDKVLGTIMLNLGHELDTSELASWPNVKGIFGPSDSMEKLCQG
LSAIIEGENWLSRRLLDQLVNYYKGKEASHIIDPTIEVELTRREVQVLQMLKEGGSNMEI
ADSLFISEHTIKSHLYNIFRKIEVKNRTQATSWARRNL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacattatgggacagtataaagaaaaacctgaaatcctaatgatcactcaacaa
agtctgcagagtgagaacttcaaggagatgctttcaaaaaacaccgataccaagattacg
attatcgatagcaaaaatccaagctatcatgaactcattccagaacaatatttcctgttg
gtagatttttcagtagatacgccatctgatactttagtttatttaaaggatagcgataaa
gtattaggtactattatgctcaatttagggcatgagttggatacatcggagttagcttct
tggcccaatgttaaaggtatttttggtccaagtgattctatggagaaattatgccaaggc
ttaagtgcaattatagaaggagagaattggctatcgcgtcgtttgcttgatcaacttgtc
aattattataaaggaaaagaagcgagtcatattattgatccaactatagaggtagagctc
acgcgaagagaggttcaagttttacagatgctgaaagaaggcggatcaaatatggaaatt
gccgactctttatttatcagcgagcatactattaaatctcacctttacaacatatttcga
aaaatagaagtcaaaaaccgaacgcaagccactagttgggcgagaagaaacctgtag
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