Vibrio owensii: A9237_19590
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Entry
A9237_19590 CDS
T04844
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vow
Vibrio owensii
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vow03016
]
A9237_19590
Enzymes [BR:
vow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A9237_19590
Transfer RNA biogenesis [BR:
vow03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A9237_19590
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AQW60239
LinkDB
All DBs
Position
2:complement(679057..681060)
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AA seq
667 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGSIKATDKGFGFLEVDSKTSFFIPPAYMKKCMHGDKV
VAIIRTENEREVAEPQELLEQAVTRFIGRVKMFKGKLNVAPDHPQLKKLSLKAKLKKGLK
PDEFAEGDWVVAHLIRHPLKGDNSFFVEISEKITDSNDKIAPWWVTLAQNDLPNSEPAGI
ENWELKDDADLERVDMTHVPFVTIDGESTKDMDDALYAKKTESGDFELTIAIADPTAYIT
PEDDMDKVARERGYTIYLPGRNIPMLPRDLADNLCSLIEGEVRPAICCTVTVSKDGVIGD
DINFFAANIKSHARLAYDNVSDWLENGSSDKWQPSEEIATIVRDLFDFSRARAEWREKNA
VVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEESMITANICAGRTLREKFETGVFNT
HAGLKAEKIEEVVELVNPEGTLEFTAESIATLEGFAALRRWLGEQETSYLDNRIRKFQTY
SEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILNKEPVQKPDDEVGEELAL
HRKHHKIAERNVSDWLYARTLADEPNKKTCFTGEIFDINRAGARVRLLENGAAAFIPGSL
ILDNKERIECNGDNGTISIDKEVVYKLGDTLEIVLADVNQENRSIVAKPTQVFADKPAPQ
TEETVSE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatccgctattagctcagcttaagcagcaaatccaagaaaacctgcct
aaaaaagaaggctcgatcaaagcaacagataaaggctttggcttcctggaagtggacagt
aaaaccagcttcttcatcccaccagcgtacatgaaaaagtgcatgcacggcgacaaagtg
gttgccatcatccgcacagaaaacgaacgcgaagtcgcggaaccacaagagctgctagaa
caagccgtaactcgctttattggccgagtaaaaatgttcaaaggcaagctaaacgtagca
cctgatcacccacagctgaaaaagctttctcttaaagcgaaattaaagaaaggtctaaaa
cctgatgaatttgctgaaggtgactgggttgtcgcgcatcttattcgccacccgcttaaa
ggcgataactctttctttgtagaaatttcagagaagattaccgattcaaacgacaagatt
gcaccttggtgggtaacgcttgctcaaaacgatctacctaactctgagccagcaggtatc
gagaactgggaactgaaagacgacgcggatctagaacgtgtagacatgactcacgttcct
ttcgtgactatcgatggtgaatcaaccaaagatatggacgacgcactgtacgcgaagaag
acagaatctggcgatttcgagctgactatcgcaatcgcagacccaacagcgtacatcaca
ccagaagacgatatggataaagtcgctcgcgaacgcggctacactatctacctaccaggc
cgtaacatcccaatgctgcctcgcgatctagcagataacctatgttctctgattgaaggc
gaagtccgccctgctatctgctgtacagtaacagtaagtaaagatggcgtgattggtgat
gacatcaacttctttgcagcgaacatcaaatcacacgctcgtctagcatacgacaacgta
tctgactggctagaaaacggcagttcggataaatggcaaccatcagaagagattgcgacg
attgtacgcgatctattcgatttctctcgcgctcgtgctgaatggcgtgagaagaacgca
gttgtgttcccagatcgccctgactaccgtttcgaactaagcgaagacaacgacgttgtt
gcaatccacgctgacatgcgtcgtagcgcaaaccgtcttgttgaagagtcgatgatcacg
gcaaacatctgtgctggccgtactctgcgtgaaaagttcgagactggcgtctttaacact
catgcaggcctaaaagcagagaagattgaagaagtggttgaactggttaacccagaaggc
acactagaattcactgcagaatctatcgcaacactagaaggctttgccgcacttcgccgc
tggttaggtgagcaagagacgtcatacttagacaaccgtattcgtaagttccaaacgtac
agtgaagtaggtaatcaacctcttcctcattacgctatgggtcttgatatctacgcgact
tggacttcaccaattcgtaaatacggcgacatgatcaaccaccgcatgctgaaggcagtt
attttgaacaaagaacctgttcaaaagccagatgatgaagtgggcgaagagctagctctg
caccgcaaacatcacaaaattgccgagcgaaacgtgtctgattggctatatgcacgcact
ctagcggacgagccaaacaagaaaacgtgtttcacaggtgagattttcgatattaatcgt
gctggcgcacgtgtccgacttctcgaaaatggcgcagcagcctttattcctggtagcttg
attcttgataataaagaaagaattgagtgtaacggcgacaacggtaccatttctatcgac
aaagaagtggtatacaagttaggtgacacattggaaatcgttctagcagacgtaaaccaa
gagaaccgcagcatcgttgcaaagccgacccaggtattcgctgataaaccagcaccacaa
acagaagaaactgtgagtgagtaa
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