Vibrio owensii: A9237_19595
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Entry
A9237_19595 CDS
T04844
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
vow
Vibrio owensii
Pathway
vow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9237_19595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vow03019
]
A9237_19595
03009 Ribosome biogenesis [BR:
vow03009
]
A9237_19595
Enzymes [BR:
vow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9237_19595
Messenger RNA biogenesis [BR:
vow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9237_19595
Ribosome biogenesis [BR:
vow03009
]
Prokaryotic type
rRNA helicases
A9237_19595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Flavi_DEAD
WSD
Motif
Other DBs
NCBI-ProteinID:
AQW60240
LinkDB
All DBs
Position
2:681441..683366
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AA seq
641 aa
AA seq
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MQDSVIQFSDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAF
SLPLLNKLDLDQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMR
ALKNGAHVVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPES
AQRVLFSATMPPMLKNIVERFLREPVTVDVAGKNHTVDKVQQQFWVVKGVEKDEAMSRLL
ETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDILV
ATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTI
ERVTKSSMEEIQLPLRDQVAEARLSKLAAELEAEKEHKSLDKFAELVEKLQTSLEIDPAM
LAAMLLKRQQGKRPLFYIGEDPMVEAIERDKQRRKERREGGREGGRSFNTQDWDTYQLQV
GREQGVQVKDIVGALANELGLGKGSIGAIKLAQGHTFVQLPKAMTSDAANKLSKLRIRQQ
DVGAVVCDFDDFRESRGGRRDGGRRDGGRRDGGGYRGNREGGNRGGERREGGRREGGFRG
NRDGNREGGERRFDRNRGGDHRGAHRGERGHGGRGRRTQDA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattctgttattcaattcagcgatttatctctgaatgattctatcctttctgct
ctagacggaatgggtttcgtgtcaccaactccaattcaggctgcggcaatcccacaccta
ttggaaggtgctgacgcgctgggcaaggcacaaacgggtacaggtaaaacggcagcattc
tctctgcctcttctaaacaagctagatcttgatcaacgtaaaccacaagcaatcgttctt
gctccaactcgtgagctagcgatccaggttgcggctgaaatgaaaaaccttggtaaaaac
atcaagggtcttaaagttctagaaatctacggtggtgcatctatcgtcgatcaaatgcgt
gctcttaaaaacggtgcacacgttgttgttggtactcctggccgtgttcaagaccttatc
aaccgcgaacgtctacatcttgacgaagtaaatactttcgtgcttgatgaagcggacgaa
atgctaaacatgggtttcgtggacgacgtaactgcgatcatggagcacgctcctgaatct
gcacagcgcgttctattctctgcaactatgcctccaatgctgaaaaacattgttgagcgc
ttcctacgtgagcctgtaacagttgacgttgctggtaagaaccacactgtagacaaagtt
caacagcagttctgggtagtgaagggcgtagagaaagatgaagcgatgtctcgtcttctt
gaaactgaagaaactgacgcgtcaatcgtattcgtacgtactcgtcaagacactgagcgt
ctagctgattggctatctgcacgtggctttaaagctgctgcactgcacggtgatattcct
cagtctctacgtgagcgtactgttgatcacatcaaacaaggtgttatcgacatcctagtt
gcaactgacgttgttgcacgtggtctagacgttccacgtattactcacgtatttaactac
gacatcccattcgatgttgagtcttacatccaccgtatcggtcgtactggccgtgctgga
cgtaaaggtaaagcgatccttctagttcgcactaaccaaatccgcatgcttcgcactatc
gagcgcgtaactaagtcgtctatggaagaaatccaacttcctctacgtgaccaagttgct
gaagctcgtctaagcaagctagcagctgagctagaagctgagaaagagcacaagtcacta
gacaagttcgctgagctagtagagaaactacaaacttctctagagatcgacccagcgatg
cttgctgcaatgcttcttaagcgtcagcaaggtaaacgtcctctattctacattggcgaa
gacccaatggttgaagcgattgagcgtgataagcaacgtcgtaaagagcgccgtgaaggt
ggtcgtgaaggcggtcgtagcttcaacactcaagattgggatacttaccagcttcaagtt
ggtcgtgagcaaggtgttcaagttaaagacatcgttggcgctctagcaaacgaactaggt
cttggtaaaggctctatcggtgcgatcaagctagcgcaaggtcacacattcgttcagcta
cctaaagcaatgacttcagatgctgcgaacaagctaagcaaactacgtatccgtcaacaa
gatgttggtgctgtagtatgtgacttcgatgacttccgcgagtctcgtggtggtcgccgt
gacggtggtcgtcgcgatggtggtcgtcgtgatggcggcggttaccgtggcaaccgtgaa
ggcggcaaccgtggtggtgaacgtcgtgaaggcggtcgtcgcgaaggtggcttccgtggt
aaccgcgatggtaaccgtgaaggtggcgaacgtcgtttcgatcgtaaccgtggtggtgat
caccgtggtgcgcaccgtggtgaacgtggtcacggcggccgtggtcgtcgcacgcaagac
gcataa
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