Vibrio owensii: A9237_20590
Help
Entry
A9237_20590 CDS
T04844
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vow
Vibrio owensii
Pathway
vow00260
Glycine, serine and threonine metabolism
vow00460
Cyanoamino acid metabolism
vow00630
Glyoxylate and dicarboxylate metabolism
vow00670
One carbon pool by folate
vow00680
Methane metabolism
vow01100
Metabolic pathways
vow01110
Biosynthesis of secondary metabolites
vow01120
Microbial metabolism in diverse environments
vow01200
Carbon metabolism
vow01230
Biosynthesis of amino acids
vow01240
Biosynthesis of cofactors
vow04981
Folate transport and metabolism
Module
vow_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A9237_20590 (glyA)
09102 Energy metabolism
00680 Methane metabolism
A9237_20590 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A9237_20590 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A9237_20590 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A9237_20590 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A9237_20590 (glyA)
Enzymes [BR:
vow01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A9237_20590 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AQW60427
LinkDB
All DBs
Position
2:complement(896592..897887)
Genome browser
AA seq
431 aa
AA seq
DB search
MNKSYPNHSLENFFSTNLSATDDAVFAGIQAEFARQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYEDVRQLALEHQPKM
IIAGGSAIPRTIDFAKFREIADEVNAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIASKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDAEVEKRVRKQV
KELCSRYPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgacgctgtctttgctggaattcaggcagaattcgctcgccaaaacgaacaaatc
gaacttatcgcttctgagaacatcgtttctaaagcggtaatgcaagctcaaggcacatgc
ctaacaaacaaatacgctgaaggttacccaggtcgccgttactatggtggttgtgagcac
gtagatacagtggaagccattgctatcgaacgcgcgaaaaaacttttcaattgtgaatac
gcaaacgttcaaccacactcaggcgcacaagcaaacggcgcagtaaaactggcgctactt
caacctggcgacacaattcttggtatgtctctagacgcaggtggtcacctaacacacggt
gctcgccctgcactttctggtaagtggtttaatgctgttcaatacggcgttgaccgcgaa
acactagaaatcaactacgaagacgttcgccaacttgcacttgagcaccaacctaaaatg
atcatcgcaggcggtagtgccattccacgtactatcgactttgcaaaattccgtgaaatc
gcagacgaagtaaacgcgattcttatggtcgacatggcacacattgccggtcttatcgca
acaggcgcgcaccctagcccgcttcctcacgcacacgttgttacaaccacaacgcacaaa
acattacgtggcccacgtggcggtatgatcctgaccaaccacgaagacatcattaagaaa
atcaactcagcggtattcccaggtctacaaggcggcccactgatgcacgtgattgcttct
aaagcagtggcgttcggtgaggcgcttggtcctgaattcaaaacttatattgattcagtg
atcaacaacgcaaaagttctggcggaagtattgcaaactcgcggttgcgacatcgtaacc
ggtggtacagacacgcacttaatgctggttgaccttcgccctaaaggcttgaaaggtaac
aaagcagaagaagcactagagcgtgcaggtatcacgtgtaacaaaaatggcatcccattc
gacacagagaagcctatgattacatcgggcatccgtttaggaacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaattggattggtgacgtactggac
ggtttggtgaacaaccctgaaggtgacgcagaagtagaaaaacgcgtacgcaagcaagtg
aaagagctttgcagtcgttaccctctttaccaataa
DBGET
integrated database retrieval system