Vibrio owensii: A9237_20925
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Entry
A9237_20925 CDS
T04844
Name
(GenBank) sensor domain-containing phosphodiesterase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vow
Vibrio owensii
Pathway
vow05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A9237_20925
Enzymes [BR:
vow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
A9237_20925
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
Ribosomal_L5e
Motif
Other DBs
NCBI-ProteinID:
AQW60490
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Position
2:complement(970675..972585)
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AA seq
636 aa
AA seq
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MGTLQTLDYEIPESMRKSWQNIVNLLARIADVPTTLIMRIHPNHIEVNTSSETDNNPYKV
GDKEELGHGLYCEHVIKNKRELIVPNALIDEEWKDNPDIKLGMISYCGLPLYWPNGETFG
TICMLDTKENQYNDTYRELLSTFKESIEAQLAVVFQQHKLLRLNNELKNRVENRTTDLAQ
LSYSLTKEIDRRKAAEKQVSYQQTHDHGTGFLNRVALEEVLDHILETMDHDQQSLVVINV
GFSNARSIETKYGFEAFDEVLKEFRFRLGHNESSYFVTGRPSSNDLVIVVSGEDIESKVQ
HLLEDITHVSVGNFHIDENEVHLHSYIGVVQAHRSSHAKQLLQNACYAMLLCKESGESYN
YFCESHTQELNNHNQLESYLLQAVRNDDLMLYFQPKVLPHTHKWIGAEALLRWRHPVLGD
VSNEALIHMAEQNGLIFEVGSFVLRTAIDKAKQWSELVDNFKIAVNVSPIQLQNVNFAEQ
IEHLLETFHLPAHFLELEVTESALIADEVVARNTLNKLHNLGVTLSLDDFGTGYASFSYL
KKYPFDAIKIDKSFVQQMEKSDDDRAIICSIIHIAKKLDLQVVIEGIESAQQEQFLINEG
CDIGQGFLYGKPMPCNEFEQSLFNQNLLGGQYTYSS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggtacattgcaaacattagattacgaaatacccgaatccatgcggaaaagctggcaa
aatatcgtcaacctgctcgcgcgcattgcggatgtcccaactacgctgatcatgcgtatc
cacccaaaccacattgaagtaaatacctccagcgagactgataacaacccttataaagtc
ggcgacaaagaagaacttggtcatggcctttactgtgaacacgtcattaaaaacaaacgc
gaactcatcgttcctaacgcgctcattgatgaagagtggaaagacaatcctgatattaag
ctcggcatgatctcgtattgtggcttaccactctattggccaaacggggagacgttcggc
accatctgtatgctggataccaaagagaatcagtacaatgacacctaccgagaactattg
agcacatttaaagaatccatagaggcgcaactagccgtcgtttttcaacaacataagtta
ctgcgcttaaataacgaactgaaaaatagagtcgagaatagaacgactgacctcgcccaa
cttagctactcactaacaaaagaaatcgaccgacgtaaggccgcagaaaagcaagtaagc
tatcaacaaacccacgatcatgggacgggctttttaaaccgcgttgcacttgaagaagtg
ttagaccacatcttagaaaccatggatcatgaccaacaatctttggtggtgattaacgtc
ggttttagtaacgcgcgcagtatcgaaacaaaatacggatttgaagcctttgacgaggta
ttgaaagagtttcgcttccgcctaggccacaatgaatccagttattttgtgactggtcgt
ccaagttcaaacgacttggtgattgttgtctctggtgaagacatcgaatcaaaagtccaa
cacttacttgaagacatcactcatgttagcgtcggcaacttccacattgatgaaaacgaa
gtccaccttcactcctatattggcgtcgttcaagcgcacagaagcagtcacgccaaacaa
ctgctgcaaaacgcctgttatgccatgttgctatgtaaagagtctggtgaatcgtacaac
tacttctgtgagagccacactcaagaactgaacaatcacaatcagcttgaaagctaccta
ttacaggccgttcgcaacgacgacttaatgctgtacttccaacctaaggtacttccacat
acacacaaatggataggtgccgaagcactattgcgatggcgtcatcctgtcttgggtgat
gtatccaacgaagcattaattcacatggcagaacaaaacggattgatttttgaagtcggc
tcttttgtcttgagaaccgcgattgataaagccaaacagtggtctgagctggtggacaat
ttcaagattgccgtgaacgtgtctcctatccaattacaaaacgttaattttgctgagcaa
atagaacacctacttgaaaccttccacctgccggcacatttcctagagttagaggtgact
gagagtgcgttgattgcagatgaagtcgtggctcgtaacacattgaataaattgcacaac
cttggcgtgacactgtcacttgatgactttggcacaggatacgcatcattcagttatttg
aagaaatacccttttgacgcgattaagatcgataaaagctttgttcaacaaatggagaaa
tctgatgacgacagagccatcatttgttcaataatacacattgcgaaaaagctcgatcta
caagtggtcatagaaggcattgaatcagctcaacaagagcagtttttgatcaatgaaggc
tgcgatattggacaaggctttttgtatggtaaacctatgccgtgcaatgaatttgaacaa
agtttgtttaatcaaaaccttttaggtggtcaatacacctattcttcctaa
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