Vibrio owensii: A9237_26515
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Entry
A9237_26515 CDS
T04844
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vow
Vibrio owensii
Pathway
vow03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A9237_26515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vow03000
]
A9237_26515
03400 DNA repair and recombination proteins [BR:
vow03400
]
A9237_26515
Enzymes [BR:
vow01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
A9237_26515
Transcription factors [BR:
vow03000
]
Prokaryotic type
Helix-turn-helix
AraC family
A9237_26515
DNA repair and recombination proteins [BR:
vow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A9237_26515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AQW61561
LinkDB
All DBs
Position
2:2236947..2238314
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AA seq
455 aa
AA seq
DB search
MLIHPHTSLTFEQCQKARMARDSRFDGRFYIAVKTTGIFCRPICPANLPKEENVEYFTDK
TQALKAGYRPCLRCRPDSAPGSWAWKGVETTFQRAINMIDQGALHHQSLADLSERLGISD
RYLRMLFEQYLGMSPKQYAQYQQLMFAKQLLHSSSMSVTEVGFAAGFNSTRRFNDAFQKI
LQLTPSQVRRKEFDGVGTNRIVLPYRGALNWQHMLDFYRLRAIEGMEEVTQDAYLRNVLL
DDCHARFKVTQGEGYLEMEFDIEDVTKLQNLVSGVRRMFDLDADICTVEQHLEYIAPGLV
KTHGIRIPGVWSAWEAGVRAVLGQQVSVKAAIGQLNLLVATLSSDQQARHFPTPEAIANA
DVSFLRMPQSRKDTLVRFAQYMQQNPEADPQQWLELKGIGPWTVSYAQLRGQSQPDCFLD
KDLVVKKAMPNYPSLNAHTASPWGSYATFHLWNQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcatccacccacacacatcgttgaccttcgaacaatgtcaaaaagcacgtatggca
cgtgacagccgttttgatgggcgcttttacattgcggtgaaaaccacagggatcttctgc
cgcccgatctgcccagctaatttgcccaaagaggaaaacgtcgagtacttcactgacaag
acgcaagccttgaaggcgggttatcgtccgtgtttgcgttgtcgcccggatagtgcacca
ggatcgtgggcttggaaaggggttgaaaccacatttcaacgtgcgatcaacatgatcgat
caaggtgcattgcatcatcagtctcttgcggatctctctgagcgtctcgggatctcggat
cgttacttgcgcatgctgttcgaacaatatttggggatgtcacctaagcagtatgcgcag
tatcagcaattgatgtttgccaagcagcttctgcattcgagttcgatgtcagtcactgaa
gtcggctttgcagcaggttttaacagcactcgacgtttcaatgatgcgtttcaaaagatc
cttcagctaacgccttctcaagtgcgcagaaaggagtttgatggcgtggggacgaatcga
atcgtgctcccttatcgcggagctttgaactggcaacacatgctcgacttttatcgtctg
cgtgcgattgagggaatggaagaagttacacaagacgcatacctgcgcaatgttctactc
gatgattgccatgcacgatttaaggtcactcaaggggagggttaccttgagatggagttc
gacattgaagacgtcacgaaattgcagaatttggtgtctggtgtgcgtcgtatgttcgac
cttgatgcggatatttgcacggtggagcaacaccttgaatacattgcgccgggattggtg
aaaacccacgggattcgtattccgggcgtctggagtgcgtgggaggccggtgtacgtgct
gtgctagggcagcaagtgtcggtcaaagcggctatcgggcaacttaacttgttggtagca
acgctcagtagcgatcagcaagcgcgtcactttccgacaccagaagccattgcgaatgct
gatgttagcttcttgcgtatgccgcaaagccgtaaagacacgcttgtgcgatttgctcag
tacatgcagcaaaacccagaagccgatccgcagcaatggctggaattaaaaggcattggt
ccgtggacggtgagctatgcgcaattgcgtggccaatctcagcccgattgttttttagat
aaagacttggtggtgaagaaagccatgccaaattatccgtcattgaatgctcatactgcg
tcgccttggggcagttacgcgacttttcacttatggaatcaatcatga
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