Vogesella sp. XCS3: LCH97_01290
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Entry
LCH97_01290 CDS
T07617
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vox03016
]
LCH97_01290 (truB)
Enzymes [BR:
vox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LCH97_01290 (truB)
Transfer RNA biogenesis [BR:
vox03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCH97_01290 (truB)
Prokaryotic type
LCH97_01290 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UDM17334
LinkDB
All DBs
Position
253147..254070
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AA seq
307 aa
AA seq
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MSAPRRVKLPINGVLLLDKPYLLSSNTALQRARWLYSAAKGGHTGVLDPLATGLLPLCFG
EATKFSSYLLDADKGYRATVKFGEVTTTGDIEGEVLLQRPVAFTLPQLQAAIAAHTGPIS
QVPPMYSALKHQGKALYEYAREGIEIKREARDVTIHRIDLISFDGTTAVIDVLCSKGTYI
RTLGQDIGEMLGCGAHLTGLRRTTTGGFLLENAITLEQLEATPPEARGQLLLPIDVLVAH
FDEQTLPARDAERFCHGQAVRAPEKCETMRRFRVYREATREFLGLAEARDDSLLHPVRVT
AAPAAAV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaccgcgtcgcgtaaagctgcctatcaatggtgtgctgctgctggacaagcct
tatttgctaagtagcaacaccgctttgcagcgtgcgcgctggctgtacagtgcggccaaa
ggcggccataccggcgtgctggacccgctggctaccggcctgttgccgctgtgttttggc
gaggcgaccaagttttcctcgtatctgctggatgccgacaagggctaccgcgccaccgtc
aagtttggtgaagtcactaccaccggggatatcgagggcgaagtgctgttgcagcgcccg
gtagcctttacgctgccgcagctgcaggccgccattgctgcgcataccggccctatcagc
caggtgccgccgatgtattcggcgctgaagcatcagggcaaggctctgtacgagtacgcg
cgtgaggggatcgagatcaagcgcgaggcgcgcgatgtcaccattcaccgcatcgacctg
atctcgttcgacggcacgactgccgtgatcgacgtgctgtgcagcaagggcacctatatc
cgaacgctagggcaggatatcggcgagatgctgggttgtggcgcacaccttaccgggctg
cgccgcaccactacaggcggtttcctgctggaaaacgccatcacgctggagcagctggaa
gccacgccgccggaagcccgcggccaactattgctgccgatagacgtgctggtggcgcat
tttgacgagcagaccctgcctgcgcgcgacgccgagcgtttttgtcacggccaagccgtg
cgtgcgccggaaaagtgtgagacaatgcgccgttttcgtgtataccgcgaggcaacgcga
gaatttctcgggctggccgaggcaagagacgacagtctgttgcaccctgtccgggtaacg
gctgctccggcagccgctgtgtga
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