Vogesella sp. XCS3: LCH97_01995
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Entry
LCH97_01995 CDS
T07617
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00260
Glycine, serine and threonine metabolism
vox00460
Cyanoamino acid metabolism
vox00630
Glyoxylate and dicarboxylate metabolism
vox00670
One carbon pool by folate
vox00680
Methane metabolism
vox01100
Metabolic pathways
vox01110
Biosynthesis of secondary metabolites
vox01120
Microbial metabolism in diverse environments
vox01200
Carbon metabolism
vox01230
Biosynthesis of amino acids
vox01240
Biosynthesis of cofactors
vox04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LCH97_01995
09102 Energy metabolism
00680 Methane metabolism
LCH97_01995
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LCH97_01995
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LCH97_01995
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LCH97_01995
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LCH97_01995
Enzymes [BR:
vox01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LCH97_01995
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
UDM17469
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Position
complement(453557..454813)
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AA seq
418 aa
AA seq
DB search
MFTQDMQIAGFDDALWAAIQAENQRQQDHIELIASENYTSPRVMQAQGTQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRACQLFGAQYANVQPHSGSQANAAVYMALLQPGDTILGMS
LAHGGHLTHGASVNFSGKIYKAVQYGINTESGAIDYDEVQRLATEHQPKMLVAGFSAYSL
VVDWARMRQIADSVGAWLFVDMAHVAGLVAAGLYPSPLPHAHVVTTTTHKTLRGPRGGLI
LAANPDEALVKKLQSLVFPGIQGGPLMHVIAAKAVAFLEALQPEFKTYQQQVLDNARTMV
AVFRQRGYTVVSGKTDDHLFLLSLIDKGLTGKAADAALGAACITVNKNAVPNDPQSPFVT
SGIRIGTPAITSRGFGSAEAGQVAHWVCDILDDIDNADVAPRVRRQVAELCAAFPVYR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgcaagacatgcagattgccggcttcgacgacgcactgtgggccgccatccag
gccgaaaaccagcgccaacaagaccacatcgagctgattgcctcggaaaactacaccagc
ccgcgcgtgatgcaggcgcaaggcacccagctcaccaacaagtacgccgagggctacccc
ggcaagcgctactacggcggctgcgagcacgtggacgtggtggaacagctggccatcgac
cgcgcctgccagctgtttggtgcacagtatgccaacgtgcagccgcactccggcagccag
gccaacgccgcggtgtatatggcgctgctgcagccgggtgacaccatcctgggcatgagc
ctggcacacggcggccaccttacccacggcgccagcgtcaatttttccggcaagatctac
aaggctgtgcagtacggcatcaacacggaaagcggcgccattgattacgacgaagtgcaa
cggctggccaccgaacaccagccaaaaatgctggtagctggcttctccgcctactcgctg
gtggtggactgggcgcgcatgcgccagattgccgacagcgttggcgcctggctgtttgta
gacatggcgcacgtggccggcctggtggccgccgggctctaccccagcccgctgccgcac
gcccatgtggtaactaccaccacccacaagacgctgcgcggcccgcgcggcggcctgatc
ctggcggccaacccggacgaagccttggtgaaaaagctgcagtcgctggttttccccggc
attcagggcggcccgctgatgcacgtgatcgccgccaaggcggtggcctttctggaggcg
ctgcaacccgaattcaaaacctaccagcagcaggtactggataacgcccgcaccatggtg
gcggtgttccgccagcgcggctataccgtggtatcgggcaagactgacgaccacctgttc
ctgctgagcctgatcgacaaaggcctcaccggcaaggccgccgacgcggcgctgggcgcg
gcctgcattaccgtcaacaagaacgcggtgccgaacgacccgcaaagcccgtttgtcacc
agcggtatccgcattggcaccccggccatcaccagccgcggtttcggcagcgccgaagcc
ggccaggtagcgcactgggtatgcgatatcctggacgatatcgataacgcagacgttgcc
ccgcgcgtacgccgccaggtggccgagctatgcgcggccttccctgtgtatcgttaa
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