Vogesella sp. XCS3: LCH97_02035
Help
Entry
LCH97_02035 CDS
T07617
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vox03009
]
LCH97_02035 (dbpA)
Enzymes [BR:
vox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LCH97_02035 (dbpA)
Ribosome biogenesis [BR:
vox03009
]
Prokaryotic type
rRNA helicases
LCH97_02035 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UDM17477
LinkDB
All DBs
Position
complement(462457..463839)
Genome browser
AA seq
460 aa
AA seq
DB search
MNKAKFSTLQLPQNLLSNLDSLGYTSMTAIQAESLPAVLDGRDVIAQAKTGSGKTAAFGL
GLLTNINPRWFAIQALVLCPTRELADQVAQEIRRLARCIDNIKVITLCGGTPMAPQRASL
EHGAHIVVGTPGRLQDHLSRGTLELAGVKTLVLDEADRMVDMGFIEEIVGIVRACPRNRQ
TLMFSATYPDNIRKLAEQFMKQPHMVKVEALHDAGQIEQWWYEIDPDQRLDIVARVLHSV
RPTSALAFCNTKQRCKELVAELQQAGFSAEALYGELEQRDRDQILARFAGKTITTLVATD
VAARGLDIKDLDLVINVDVAHDPEVHIHRIGRTGRGDKHGLALTLVSPSDARRAASIEEY
QKADLAWEELADLKPAPGGPLQPPMVMLEIAGGKREKLRPGDILGALTGEGGVDGKQVGK
ITVFEFNTFVALDRHIAQQAFERLSAGKIKAKSYKMRFVE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagccaaattcagcaccctgcaactgccgcaaaacctgctttccaacctcgat
agcctgggctacaccagcatgaccgccattcaggcagaaagcctgccagccgtactggac
ggccgcgacgtcatcgcccaggccaaaaccggcagcggcaagacagcagcatttggcctg
ggcctgctcaccaatatcaacccgcgctggtttgccatccaggcactggtgctgtgcccc
acgcgcgagctggccgaccaggtagcgcaggaaatccgccgcctggcgcgctgcatcgac
aatatcaaggtgattaccctgtgcggcggcacgccaatggcgccgcaacgcgcctcgctg
gaacacggcgcccacatcgtggtgggtaccccgggccgcctgcaagaccacctgtcgcgt
ggcacgctggagctggccggcgtgaaaacgctagtgctggatgaagccgaccgcatggtg
gatatgggctttatcgaagaaatcgtcggcatcgtgcgcgcctgcccgcgcaaccgccag
acactgatgttcagcgccacctacccggacaacatccgcaagctggccgagcagttcatg
aagcagccgcacatggtaaaagtggaagcgctgcacgacgccggccagatcgaacaatgg
tggtacgagatcgacccggaccagcgcctggacatcgtcgcccgcgtgctgcacagcgtg
cggccaacctccgccctggcgttctgcaacaccaagcagcgctgtaaagagctggtagcc
gagctgcagcaggcaggctttagcgccgaagccctgtacggcgagctggaacagcgcgac
cgcgaccagatcctggcgcgctttgccggcaagaccatcaccaccctggtggctaccgac
gtggccgcccgcggcctggacatcaaggacctggatctggtgatcaacgtggacgtggcg
cacgacccggaagtgcacatccaccgtatcggccgtaccggccgcggcgacaagcacggc
ctggcgctgacgctggtcagccctagcgacgcacgccgtgccgccagcatcgaggaatac
cagaaagccgacctggcctgggaagagctggccgacctgaaaccggctcccggcggcccg
cttcagccaccgatggtgatgctggaaatcgccggtggcaaacgcgagaagctgcgcccg
ggcgacattctgggcgcgctaaccggcgaaggcggtgtagacggcaagcaggtaggcaag
atcacggtgttcgagttcaacaccttcgtggcgctggatcgccacattgcgcagcaggct
ttcgagcgcctgagcgctggcaagatcaaggccaagagctacaagatgcgctttgtggaa
taa
DBGET
integrated database retrieval system
