Vogesella sp. XCS3: LCH97_02910
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Entry
LCH97_02910 CDS
T07617
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vox
Vogesella sp. XCS3
Pathway
vox03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LCH97_02910 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vox03019
]
LCH97_02910 (orn)
03009 Ribosome biogenesis [BR:
vox03009
]
LCH97_02910 (orn)
Messenger RNA biogenesis [BR:
vox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCH97_02910 (orn)
Ribosome biogenesis [BR:
vox03009
]
Eukaryotic type
Pre-60S particles
RNases
LCH97_02910 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
CTD1
Motif
Other DBs
NCBI-ProteinID:
UDM17643
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All DBs
Position
650688..651233
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AA seq
181 aa
AA seq
DB search
MPQDPTHLIWLDMEMTGLNPDGDRIIEVAMIITDGQLNVVAESPVIAVHQPDSVLDAMDD
WNKNTHGKSGLVARVKASAVSEAQAEQLLLDFLQQYVPAGKSPMCGNTICQDRRFMARWM
PQLEAYFHYRNLDVSTLKELCKRWRPEIAKGVVKKGKHEALADILESIEELRYYREHFLK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagatcctacgcacctcatctggctggacatggaaatgaccggccttaacccg
gatggcgaccgcattatcgaagtagccatgattatcaccgacggccagctgaatgttgtg
gccgagtcgccagttatcgcagtgcatcagccagacagcgtgctggatgccatggacgac
tggaacaagaatacgcacggcaagtctggcctggtggcccgcgtgaaggcgtccgccgtg
agcgaggcgcaggccgagcagctgctgctggacttcttgcagcagtacgtgccggccggc
aagtctcccatgtgcggcaataccatctgccaggatcgccggttcatggcgcgctggatg
ccgcagctggaagcgtacttccactaccgcaatctggatgtttccacgctaaaggagctg
tgcaaacgctggcggccggagattgccaagggcgtcgtgaagaaaggcaagcacgaagcg
ctggctgacattctggagtccattgaagaactgcgctactaccgcgaacatttcctgaaa
gtgtaa
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