Vogesella sp. XCS3: LCH97_03485
Help
Entry
LCH97_03485 CDS
T07617
Name
(GenBank) cyclic diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LCH97_03485
Enzymes [BR:
vox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LCH97_03485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
UDM17737
LinkDB
All DBs
Position
756986..758500
Genome browser
AA seq
504 aa
AA seq
DB search
MKTFSLRHWLQRYTPLLAALLVLLSGSLLVLLMARNVLLEEGQASARLVHDRLKSTLDSF
ALQSTPSLQRVALNCPAFIYNARLLALHNPYIRSISLGDADGRTIRCSTITGSKPQPLPP
RHTSLRFVYLPNSPLVPNTSVLVLQLPLAGKQLYFGINRLLLNAIFPTRSEYLETYVTLG
RYKLNAVAVLDDKPRIHHTVAANPYFSVGFAYTWSGFMHYVAYHYLAYWLLVVVLAALVY
QLLVRLLASEARLCGKISQGLARGQFHAFIQPVFTREGVLSGGEVLIRWIHPKDGFIPPD
VFIKAAEHSGQINKLFSVLVQQLLATLGRPGIRLPVGFHLGLNISAPQLAQPALLTDCRA
LMSMLAPQQGVLVLELTERVEIPNNAACYGVLNQLKSEGARIAVDDFGTGHSSLIYLTRM
QVDCLKIDKSFVDLISEGSRTDIVDNVIDLARRLGMETVAEGVETAYQQAYLEQMGVDML
QGYYFARPMPLADFVRQYLPQQPA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttttccctgcggcactggctgcaacgctacacccccttgctggctgccttg
ctggtattgctctctggcagcctgctggtgttgttgatggcccggaatgtattgctggaa
gaagggcaagcgtcggccaggctggtacacgacaggctcaaaagcacgctggatagtttt
gctttgcagtccacgcccagcctgcagcgtgtggctttgaattgcccggcctttatttac
aatgcccgcctgctggccttgcacaacccgtatatccgctcaatcagcctgggcgatgcg
gatggccgtaccatacgctgcagtacgataacgggtagtaaacctcaaccattgccaccc
cgccatacctcgctacgtttcgtttatttgccgaatagtccgctggtgcccaatacctcg
gtgctggtattgcagctgccgctggcgggtaagcagctgtattttggtatcaaccgcctt
ttactcaacgccattttcccgacacgctccgagtacctggaaacctatgtcaccttgggg
cgctacaaactcaatgcagtggccgtactggatgacaaaccgcgcatccaccataccgtg
gcggccaacccatatttttcggtgggttttgcctatacctggtcgggctttatgcactat
gtggcttaccactatctggcgtactggctgctggtggtggtgctggcggcgttggtatac
cagctgttagtcaggctgctggctagcgaggccaggctgtgcggcaagataagccaaggc
ctggcgcgtggccagtttcatgcctttatccagccggtgttcacgcgcgagggtgtgttg
tccggtggcgaagtactgatacgctggattcacccgaaagacggttttatcccgccagat
gtattcatcaaggcggcagagcatagcgggcagatcaacaagcttttcagtgtgctggtg
cagcagctgcttgccacgctgggccgccccggcattcggttgccggtaggtttccacttg
gggctaaatatcagtgcgccgcagctggcacagcccgccttgttgacggactgtcgggcg
ctgatgagcatgctggcgccgcaacaaggggtgctggtactggagttgaccgagcgggtg
gaaattccgaataacgccgcgtgctacggggtgctgaaccagttaaagagcgaaggcgcc
cgcattgccgttgatgatttcggcacaggccactcgtcgctgatctacctgacacgcatg
caggtagactgcctcaagatagacaagagttttgtcgacctcatttccgaaggcagccgt
accgatattgtcgacaatgtcatcgacctggcgcgccggctgggcatggagacggtggcc
gagggggtggaaacggcctatcagcaagcctatttggagcagatgggggtggacatgttg
caaggctactattttgcccgccccatgccgctagccgattttgtccgccagtacctgccg
cagcagccggcctag
DBGET
integrated database retrieval system
