Vogesella sp. XCS3: LCH97_03935
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Entry
LCH97_03935 CDS
T07617
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vox03032
]
LCH97_03935
03036 Chromosome and associated proteins [BR:
vox03036
]
LCH97_03935
03400 DNA repair and recombination proteins [BR:
vox03400
]
LCH97_03935
DNA replication proteins [BR:
vox03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LCH97_03935
Chromosome and associated proteins [BR:
vox03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LCH97_03935
DNA repair and recombination proteins [BR:
vox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LCH97_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Lmo2446-like_N
Barstar
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UDM17823
LinkDB
All DBs
Position
complement(861095..861364)
Genome browser
AA seq
89 aa
AA seq
DB search
MNKSELIDAIAAKADISKAAAGKALDGMIDAVTDALKAGDTVTVVGFGTFYVGERAERSG
RNPKTGETITIAAAKSPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaactgattgacgctatcgccgccaaggcagacatttccaaagcagct
gccggtaaggcactggatggcatgatcgatgccgtaaccgatgcgctgaaggctggcgac
actgtcactgttgtaggctttggtactttctacgtaggcgagcgcgccgagcgtagtggt
cgtaacccgaagactggcgagaccattactatcgctgctgccaagtctccgaaattccgt
gctggtaaggcactgaaagacgcactgtaa
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