Vogesella sp. XCS3: LCH97_05730
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Entry
LCH97_05730 CDS
T07617
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LCH97_05730 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vox01007
]
LCH97_05730 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vox03016
]
LCH97_05730 (serS)
Enzymes [BR:
vox01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LCH97_05730 (serS)
Amino acid related enzymes [BR:
vox01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LCH97_05730 (serS)
Transfer RNA biogenesis [BR:
vox03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LCH97_05730 (serS)
Prokaryotic type
LCH97_05730 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Myosin_tail_1
TMF_TATA_bd
DUF2046
ATG16
Uds1
DUF1664
Phage_GP20
APG6_N
Motif
Other DBs
NCBI-ProteinID:
UDM18167
LinkDB
All DBs
Position
1214739..1216025
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AA seq
428 aa
AA seq
DB search
MLDIQLLRSNIEEVAARLAARGYTLEADAFNSLEAERKSLQTRMQDLQSQRNSSSKQIGI
AKKNGEDVSAIMAQVASLGDELKAAEDAFAAVQSRLDNWLLTIPNLPHESVPAGEDESGN
VEVRRWGTPRSFDFDIKDHVDVGAPLGLDFETGAKLSGARFTVLRADIARLHRALAQFML
NTHTEQHGYSETYTPYIVNSDVLYGTGQLPKFAEDMFRVERGGEAAAQAQYLISTSEITM
TNMVRESVLKHDELPLKFTAHSPCFRSEAGAYGRDTRGLIRQHQFDKVEMVQIAHPEHSF
AALDEMVGHAEVILQQLGLPYRVMALCSGDMGFGAHKTFDLEVWLPAQNTYREISSCSNM
GDFQARRMMARFKDADGKNRYVHTLNGSGLAVGRTLVAVLENYQNADGSVTIPEVLRPYM
GGRDKIGG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctggacattcaactgctgcgcagcaatatcgaagaagtggcggcccgcctggccgcc
cgtggctacaccctggaagcagacgctttcaacagcctggaagccgaacgcaaatccctg
caaacccgcatgcaggacctgcaatcccagcgcaacagcagctccaagcagattggcatt
gccaagaaaaacggcgaagacgtgtccgccatcatggcgcaggttgcctcgctgggtgac
gagctgaaggccgccgaagacgccttcgccgcggtacaaagccgcctggacaactggctg
ctcaccatccccaacctgccgcacgagtcggtaccggcgggtgaagacgagagcggcaac
gtggaagtgcgccgctggggcaccccgcgcagctttgatttcgacatcaaggaccacgtc
gacgtgggcgccccgctgggcctggacttcgaaaccggcgccaagctgtccggcgcacgc
tttaccgtgctgcgcgccgacatcgcccgcctgcaccgcgcgctggcgcagttcatgctg
aacacccataccgaacaacacggctacagcgaaacctacaccccgtacatcgtcaacagc
gacgtgctgtacggcaccggccagctgccgaagtttgccgaagacatgttccgcgtcgag
cgtggtggcgaagctgccgcccaggcgcagtacctgatctccacctcggaaatcaccatg
accaatatggtgcgcgagtcggtactgaaacacgacgagctgccgctgaagtttaccgcc
cactcgccttgcttccgctccgaagccggcgcctacggccgtgacactcgcggcctgatc
cgccagcaccagttcgacaaggtggaaatggtacaaatcgcccaccccgagcactcgttt
gccgcgctggacgaaatggtgggccacgccgaagtcatcctgcagcagctgggcctgccg
taccgcgtgatggcgctgtgcagcggcgacatgggctttggcgcccacaagaccttcgac
ctggaagtgtggctgccagcgcagaacacctaccgcgagatcagctcctgctccaatatg
ggcgacttccaggcgcgccgcatgatggcccgcttcaaggacgccgatggcaaaaaccgc
tacgtacacaccctgaacggctccggcctggcagtgggccgtacactggtagcagtactg
gagaactaccagaacgcagacggcagcgtcaccatcccggaagtgctgcgcccgtacatg
ggtggccgcgacaagatcggcggctaa
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