Vogesella sp. XCS3: LCH97_05845
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Entry
LCH97_05845 CDS
T07617
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vox03009
]
LCH97_05845 (rimO)
Enzymes [BR:
vox01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LCH97_05845 (rimO)
Ribosome biogenesis [BR:
vox03009
]
Prokaryotic type
ribosomal protein modification factors
LCH97_05845 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UDM18190
LinkDB
All DBs
Position
complement(1242770..1244089)
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AA seq
439 aa
AA seq
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MSHIAPKVGFVSLGCPKAASDSEQILTRLRAEGYEISGTYNGADLVVVNTCGFIDAAVQE
SLDAIGEALNENGKVIVTGCLGAKGDVVKEAHPSVLAITGPHATDEVMTHVHTHLPKPHD
PFVDLVPDIGVRLTPKHYAYVKISEGCNHRCTFCIIPSMRGDLDSRAIDSVLSEAANLAK
AGVKELLIISQDTSAYGVDQKYKLGFYNGRPIKTRLLELCEELGKHGIWVRLHYVYPYPS
VDDIIPLMAEGKILPYLDIPFQHASQKILKLMKRPANSENVLGRIKKWREICPDLVIRST
FIVGFPGETEEDFEELLAFIEEAQLDRVGCFTYSPVEGAAANELADPVPEDVKEARKERF
MAVQAEISAARLAARVGRTLTVLVDEIDEEGTAICRSYADAPEIDGLVFIEDADDLNVGD
FVQVEIVDASEHDLWGERV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacattgctccaaaagtaggcttcgtgagtcttggctgtccaaaagccgcttcc
gattccgagcagatcctgacgcgcctgcgcgccgagggttatgaaatttccggtacgtac
aatggtgctgacctggtggtcgtcaatacctgtggttttattgatgcagcggtgcaagag
tcgctggatgccatcggtgaggcgctcaacgaaaacggcaaggtgatcgtgaccggctgt
ctgggtgccaagggcgacgtggtgaaagaagcgcatccgtcggtgctggccattaccggc
ccgcacgccaccgacgaggtgatgacccacgtacacacccacctgcccaagccgcacgac
ccgtttgtggacctggtgccggatatcggcgtgcgcctcacgcccaagcactacgcctac
gtgaagatttccgaaggctgtaaccaccgctgcactttctgcatcatcccgtccatgcgc
ggcgacctggatagccgagccatcgacagtgtgttgtccgaagcggccaacctggccaag
gccggcgtgaaagagctgctgatcatctcgcaagacacgtctgcctacggtgtggaccag
aagtacaagctgggcttctacaacggccgcccgatcaagacccgcctgctggagctgtgc
gaggagctgggcaagcacggcatctgggtgcgtctgcattacgtgtatccgtacccgagc
gtggacgacatcatcccgctgatggccgaaggcaagatcctgccgtatctggatatcccg
ttccagcatgccagccagaagatcctgaagctgatgaagcgcccggccaacagcgaaaac
gtgctgggccgcatcaagaagtggcgcgaaatctgcccggacctggtgatccgctccacc
ttcatcgtgggcttcccaggcgagaccgaagaagacttcgaagagctgctggcttttatc
gaagaagcacagctggaccgcgtaggctgtttcacctattcgccggtagagggcgctgcg
gccaacgaactagccgatccggtgccggaagacgtgaaggaagcccgtaaagagcgtttc
atggcggtacaggcagaaatttctgccgcccgcctggcggcacgggttggccgcacgctg
accgtactggtagacgagattgacgaagaaggtacggctatctgccgcagctacgccgac
gcgccggaaatcgacggtctggtgtttatcgaggacgccgacgatctgaacgtgggcgac
ttcgtgcaggtcgaaatcgtggacgctagcgagcacgacctctggggcgagcgcgtgtaa
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