Vogesella sp. XCS3: LCH97_06690
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Entry
LCH97_06690 CDS
T07617
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox03030
DNA replication
vox03430
Mismatch repair
vox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCH97_06690
03430 Mismatch repair
LCH97_06690
03440 Homologous recombination
LCH97_06690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vox03032
]
LCH97_06690
03400 DNA repair and recombination proteins [BR:
vox03400
]
LCH97_06690
Enzymes [BR:
vox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCH97_06690
DNA replication proteins [BR:
vox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCH97_06690
DNA repair and recombination proteins [BR:
vox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCH97_06690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UDM18339
LinkDB
All DBs
Position
1412210..1412818
Genome browser
AA seq
202 aa
AA seq
DB search
MIGALKKQWAAHRLKDPRFAMLLQEQNEELVSVDCETTSLNVRDAELLSIGAVKIRGQRI
LSSEAFYVLVRPERKPDAGSVRIHGLRPRDVSDGLAPQEAVTRLLDFIGGRPLVGYYLEY
DVAILNKYVQPLAGIKLPNRQIEVSGRYYDYKLRQNPDSNVDLRLATLVDDLRVPALPRH
DALNDAITASMLYLALKKRGFG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgataggcgcgctgaaaaaacagtgggcggcccaccggctgaaagacccgcgctttgcc
atgctgctgcaagaacagaacgaagagctggtcagcgtagactgcgaaaccaccagcctg
aacgtgcgcgacgccgagctactctccattggcgccgtcaagatacgcggccaacgtatc
ctcagcagtgaagcgttctacgtgctggtgcgtccggagcgcaagccggacgccggcagc
gtgcgcatacacggcctgcgcccccgtgacgtatcggacggccttgcgccgcaagaggcg
gtaacccgcttgctggactttatcggcggccgcccgctggtgggctactacctggagtac
gatgtggccatcctgaacaagtacgtgcagccgctggccggcatcaagctgccaaacagg
cagatcgaagtttccggccgctactacgattacaagctgcggcaaaacccggacagcaac
gtcgacctgcgcctggccacgctggtagacgacctgcgcgtccccgccctgccacgccac
gacgcactgaacgacgccatcaccgccagcatgctctacctggcgctgaaaaagcgcggt
ttcggctag
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