KEGG   Vogesella sp. XCS3: LCH97_06895
Entry
LCH97_06895       CDS       T07617                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K19641  two-component system, NtrC family, response regulator HupR/HoxA
Organism
vox  Vogesella sp. XCS3
Pathway
vox02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vox00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LCH97_06895
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vox02022]
    LCH97_06895
Two-component system [BR:vox02022]
 NtrC family
  HupT-HupR (hydrogenase synthesis regulation)
   LCH97_06895
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 AAA_2 AAA_3 AAA AAA_16 nSTAND3 HTH_50
Other DBs
NCBI-ProteinID: UDM18379
LinkDB
Position
1453886..1455322
AA seq 478 aa
MSPQATVLLVDDEIRSLEALQRTLEDDFTLFTASSADEALAILESEFIQVIVTDQRMPDM
TGVALLRRVRERHPQVVRIILSGYTDNADIIAAVNEAGIYQYLLKPWHPESLLLTVQGAA
ELFRLQQDNELLNVELKTSAPWLQGRVDGKRRELKARNAMANITRAAGSPLDKVCELLER
VAGFDIAVLIEGESGVGKELLARALHYASHRRDRPFVVENCAAMPEQLLESELFGHKRGA
FTGAYQDHIGLFQQADGGTIFLDEIGETSPAFQAKLLRVLQEGEIRPVGSPRPLKVDVRV
VSATNRKLAELVREGRFREDLYYRLSAFAVTVPPLRERPADIPLIAEKLLDDARRHYQRP
GLTLLADAQDALRLYRWPGNVRQLRNELNRMLVLADGDALGAELLSPEVLQAAAEEQVAE
LAFLAGIEGDLKTRLEALEKRILKETLTRQRWNKTRAAEELGLSRVGLRSKLTRYGLE
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagcccccaagctaccgttttgctggtggacgatgaaatccgctcgctggaagcgctg
cagcgcacgctggaagacgacttcacgctgtttaccgccagcagtgccgacgaggcgctg
gccatcctggaaagcgaattcatccaggtgatcgtcaccgaccagcgcatgccggacatg
accggtgtggcgctgctgcgccgcgtgcgcgagcgccacccgcaggtggtgcgcatcatc
ctgtccggctacaccgacaacgccgacatcattgccgccgtcaacgaagccggcatctac
cagtacctgctcaagccctggcacccggaaagcctgctgctcaccgtacagggcgccgcc
gagctgttccgcctgcagcaggacaacgaactgttgaacgtggagctgaaaacttcggcg
ccgtggctgcaaggccgggtggacggcaagcgccgcgagctgaaggcccgtaacgcgatg
gccaacatcacccgcgccgccggcagcccgctagacaaagtgtgcgagctgctggaacgc
gtggccggcttcgacattgcggtgctgatcgagggtgaatccggcgtgggcaaagagctg
ctggcgcgggcgctgcactacgccagccaccgccgcgaccgccccttcgtggtggaaaac
tgcgccgccatgccggagcagctgctggaaagcgagctgttcggccacaagcggggcgcc
tttaccggcgcctatcaagaccacataggcctgttccagcaggccgacggcggcaccatc
tttctggatgaaatcggcgaaacctcgcccgccttccaggccaagctgctgcgcgtgctg
caggaaggcgagatccgcccggtgggcagcccgcgcccgctgaaggtggacgtgcgcgtg
gtatcggccaccaaccgcaagctggccgagctggtgcgcgaggggcgctttcgcgaagac
ctgtactaccggctgtcggcgtttgccgtcaccgtgccgccgctgcgcgagcggccggcc
gatattccgctgattgccgaaaagctgctggacgacgcccgccgccactaccagcgcccc
ggcctgacgctgctggccgacgcgcaggacgcgctgcggctgtaccgctggccaggcaat
gtgcgccagctgcgcaacgagctgaaccgcatgctggtgctggccgacggcgacgcgctg
ggcgccgagctgctgtcgcccgaagtgctgcaggccgctgccgaagaacaggtggccgag
ctggcgttcctcgccggcatcgagggcgacctcaaaacgcggctggaggcgctggaaaag
cgcatcctcaaggaaacccttacccgccagcgctggaacaagacccgcgccgccgaagaa
ctgggcctgtcgcgggtaggcctgcgcagcaagctgacgcgctacgggctggaatga

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