Vogesella sp. XCS3: LCH97_07315
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Entry
LCH97_07315 CDS
T07617
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vox01011
]
LCH97_07315
Enzymes [BR:
vox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LCH97_07315
Peptidoglycan biosynthesis and degradation proteins [BR:
vox01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LCH97_07315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
SLT_2
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
UDM18460
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Position
1536983..1538920
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AA seq
645 aa
AA seq
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MKKLTPLALSVTLALSLPILAHANNAIPAVAYPAGSVDDGLSAGLDMMLLNTSPLRNGDS
VWTRAREGFQMAEVNPELVRRHERNFAGKSAYFKRTMDRGRKYLFHIMNEVERRGMPTEI
AFLPVVESAFVPGAQSHVGASGLWQFMPATGRQYGLEQTWWYDGRRDVMESTRAALDYLQ
NLYTMFGDWSLALAAYNWGEGNLSRAIAKVRARGEVETYENIQMPAETRNYVPKLLAVRN
IMLEPEKFGLKLDPFPNKPTFVATSNGRHMNIDIAAKLAEMPVAEFKELNPAFNLPVYAH
KPGRQMLLPATKLHKFETNLAKWDKPLLTWQVHVPDSDTTTSELASQFDMNPNELMTANN
LKGSALSAGRPVLVALRNNSTAPALESTDIPAQPAESATLVAFAANAGPMDTPKAVAEPV
KPAQQPDTIKTAEATPLRTLQKAEPARSDANPRPEPATVRVATRTEPVAAPSRSEPRFEP
IRAELVKPEVVKVAAKTETAGSLGDNIPVSNPDKVVSASASLHTVAAGDTLYNISRRYSM
SVTDLRSLNSLPDDTVKLGQVLKVIGTSSTVAASATDSSALRPASFSRPATAVVAVDYVV
QRGDTVFSIARKFGVAHTDILRWNNPEQLANLQPGQKVRVQNTGL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcttactccgctcgcattgtcggtcacccttgcgctgtccttgcccatactg
gctcatgccaataatgcaatacccgctgtcgcctaccccgccggcagcgtggacgacgga
ctgtctgccggcctggacatgatgctgctgaataccagcccgctgcgtaatggtgacagt
gtgtggacccgtgcgcgtgaaggcttccagatggcagaggtaaacccggagctggttcgc
cgccacgagcgcaactttgccggcaagtctgcctacttcaaacgcaccatggatcggggc
cgcaaatacctgtttcacatcatgaacgaggtagagcgccgtggcatgcctaccgaaatc
gctttcctgcctgtggttgaaagcgctttcgtccccggcgcccaatcgcatgtcggcgcc
tcgggcttgtggcagttcatgccggccacaggccgacagtacggcctggagcaaacctgg
tggtacgacggccgccgcgacgtgatggagtctacccgcgccgcactggactacctgcaa
aacctgtacaccatgtttggcgactggagcctggcactggccgcctacaactggggtgaa
ggcaacctgtcgcgggccatcgccaaagtacgcgcacgtggcgaagtggaaacttacgaa
aacatccagatgcctgccgagacacggaactacgtgcccaagctgctggccgtgcgcaac
atcatgctggaaccggaaaagttcggtttgaaactggacccgtttcccaacaagccaacg
tttgtcgctaccagcaacggtcgccacatgaatatcgacattgccgccaagctggcagag
atgccggtagccgaattcaaagaactcaacccggcctttaacctgccagtgtatgcccac
aagccaggccgccagatgctgctgcccgccaccaaactgcacaagtttgaaaccaatctg
gccaaatgggacaaaccgctgctgacctggcaggttcacgtaccggatagcgacaccacc
accagcgagcttgccagccagttcgacatgaatccgaacgagctgatgactgccaacaac
ctgaaaggcagcgcgctgtcggccggtcgcccggtactggtagccctgcgcaacaacagc
accgcccctgcgctggaaagcactgacatccctgcccagccagcagaaagcgccacgctg
gttgcctttgcggccaacgccgggccgatggatacacccaaagcagtcgccgaacccgtc
aagccggcccagcagcctgataccatcaaaacggccgaagccacgccactgcgcaccctg
caaaaagccgagcctgcccgcagcgatgcgaacccacgccccgaacccgccacggttcga
gttgccacgcgtaccgaacctgtcgcggcacctagccgcagcgaaccacgcttcgagccg
attcgcgccgagctggtgaagccagaggtagtcaaagtggctgccaagaccgaaacggcc
ggctcactgggtgacaacatcccggtaagcaacccggataaagtcgtgagcgccagcgcc
agcctgcataccgtagccgctggcgacaccctgtacaacatttcccgccgctacagcatg
agcgtgaccgacttgcgtagcctgaacagcctgccggacgacacggtaaaactgggccag
gtactgaaagttatcggcaccagcagcactgtcgcagccagcgccaccgatagcagcgcc
ctgcgcccggcatccttcagccgcccggccaccgcagtggtagcagtagattacgttgtg
caacgcggcgacacggtattcagcattgcccgcaagtttggcgtagcacataccgatatc
ctgcgctggaacaacccggaacagctggccaacctgcagccaggccaaaaggtacgcgtg
cagaataccgggctctga
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