Vogesella sp. XCS3: LCH97_08110
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Entry
LCH97_08110 CDS
T07617
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LCH97_08110 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vox01007
]
LCH97_08110 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vox03016
]
LCH97_08110 (pheT)
Enzymes [BR:
vox01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LCH97_08110 (pheT)
Amino acid related enzymes [BR:
vox01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LCH97_08110 (pheT)
Transfer RNA biogenesis [BR:
vox03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LCH97_08110 (pheT)
Prokaryotic type
LCH97_08110 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
SH3_Rv0428c
Motif
Other DBs
NCBI-ProteinID:
UDM18604
LinkDB
All DBs
Position
complement(1701706..1704066)
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AA seq
786 aa
AA seq
DB search
MQFSEQWLRSRVNPSLSTDELSYLLTMAGLEVEDVVAAAPAFTGVVVGEVKECEKHENAD
RLRVTKVDVGTGELVQIVCGAPNVAVGVKVPCALPGAILPGDFKIKPTKMRGVESGGMLC
SGKELGVPEDVDGLMLLPADAPVGQNIRDYLGLDDSLFTLKITPNRADCLSIRGIAREVA
ALTGSPLAAWNIAAVAPQIDSKLAVAIADNAPCGRYVGRVVKNVNAAAPTPDWMKRRLER
SGLRSISAIVDITNYILLEQGQPMHAFDLGKINGGITVRMAAEGEKLVCLNEKEVALTPD
LMVIADDQQPLAIAGIMGGLDSGVTTASRDIFLESAFFQPEAIAGKARALGFGSDSSYRY
ERGVDFALQTEAIERATALVLEICGGEAGPLTETVGTLPQRSSVTVRTARVARVLGVALA
AEQIAAIFTRLGLAFEQNEAGFVVSAPSFRFDVEIEEDLIEEIARVYGYDNIPADAPVAA
QTMLPQPEGLRVRSEVRRLLAGRDFQEIVSYAFVEEKWERDFAGNTNPVRLINPIASQMS
VMRSSLIGGLVDTLAANLNRKHSRVRVFEIARVFHKQADGSVQQPEVVAGLAHGGRVDEQ
WASKAERVDFYDIKADVEALLYPRVAEYRKAAHPAFHPGRCAEVLLGGAVVGVLGELHPQ
WVQAYGLTNAPVLFELAVEAVEQVGRVQLAPVSKFQPVRRDLALVVAEDVSAAAIQLAMK
AAASAFVRELALFDVYRGKGVDDGKKSLAFRIVLQAADRTLVDDEVEQAVAAMLAAAQAA
GAVLRA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttccgaacaatggctgcgcagccgcgttaacccgtcgctgagcacagatgag
ctgtcctacctgctgaccatggcaggcctggaagtagaagacgttgttgccgctgccccg
gcctttaccggcgtggtagtgggcgaagtcaaagaatgtgaaaagcacgaaaacgccgac
cgcctgcgtgtgaccaaggttgacgtgggcactggcgagctggtgcagatcgtgtgcggt
gcgccaaacgtggccgtgggcgtgaaggtgccatgcgcactgccaggcgccatcctgccc
ggcgatttcaagatcaagccaaccaagatgcgtggcgtcgaatccggcggcatgctgtgc
tccggcaaagagctgggtgtaccggaagacgtcgacggcctgatgctgctgccggccgac
gcgccggtaggccagaatattcgcgactacctgggcctggacgacagcctgttcacgctg
aagatcacgccgaaccgcgccgattgcctgtctatccgcggtatcgcccgcgaagtggcc
gcgctgaccggtagcccgctggccgcctggaacatcgccgccgtagcgccgcaaatcgac
agcaaactggccgtcgctattgccgataacgcgccgtgcggccgctacgttggccgcgtg
gtgaaaaacgttaacgctgccgcgccgacgccagactggatgaagcgccgtctggagcgt
tccggcctgcgttccatttccgccatcgtcgatatcaccaactacatcctgctggagcag
ggtcagccgatgcacgccttcgatctgggcaagatcaacggtggcatcaccgtgcgcatg
gctgccgaaggcgagaagctggtgtgcctgaacgaaaaagaagtggcgctgacacctgac
ctgatggtgattgccgacgaccagcagccgctggccatcgccggcatcatgggcggcctc
gacagtggcgtgaccaccgccagccgcgacatcttcctggaaagcgccttcttccagcct
gaagccatcgccggcaaagcgcgcgcactgggcttcggctccgactccagctaccgctac
gagcgcggtgtggattttgccctgcagaccgaagccatcgagcgcgcgactgcgctggtg
ctggaaatctgcggtggcgaagccggcccgctgaccgaaaccgtgggcacgctgccgcaa
cgtagcagcgtaacagtacgcaccgcccgcgttgcccgtgtactgggtgtggcgctggct
gccgagcagatcgctgccatctttacccgcctgggcctggctttcgaacaaaacgaagcc
ggctttgtggtgagcgcgccgagcttccgtttcgatgtcgagatcgaagaagacctgatc
gaagaaatcgcccgcgtatacggctacgacaatattcctgccgatgcgccggtggccgcg
caaaccatgctgccgcagccggaaggcctgcgcgtgcgcagcgaagtgcgccgcctgctg
gctggccgcgatttccaggaaatcgtcagctacgcctttgtggaagaaaaatgggagcgc
gactttgccggtaatactaatccggtacgcctgatcaacccgatcgccagccagatgagc
gtgatgcgctccagcctgattggtggcctggtggacacgcttgcggccaacctgaaccgc
aaacacagccgtgtgcgcgtattcgaaattgcccgtgtgttccacaaacaggctgacggc
agcgtacagcaacccgaagtggtggcaggtctggcgcacggcggccgtgtggatgagcag
tgggccagcaaggccgagcgcgtcgatttctatgacatcaaggccgatgtggaagccctg
ctgtacccgcgcgtggcggaataccgcaaggccgcgcatcctgcattccatccgggccgc
tgcgccgaggtgctgcttggtggcgccgtggtcggcgtgctgggcgagctgcacccgcag
tgggtacaagcttatggcctgaccaatgcaccggtattgttcgagctggcagtagaagcc
gtcgagcaggttggccgcgtgcagctggcgccggtcagcaagttccagccggtacgccgc
gacctggcgctggtggtggcggaagacgtaagcgctgccgccatccagctggcgatgaaa
gctgccgccagtgcctttgtgcgtgagctggcgctgttcgacgtgtaccgtggcaagggc
gtggacgacggcaagaagagcctggcgttccgcattgtgctgcaagctgccgaccgcacc
ttggtggatgacgaagtcgagcaggccgtggctgcgatgctggctgccgcccaggctgcc
ggtgccgtattgcgcgcctga
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