Vogesella sp. XCS3: LCH97_08430
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Entry
LCH97_08430 CDS
T07617
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00020
Citrate cycle (TCA cycle)
vox00190
Oxidative phosphorylation
vox00650
Butanoate metabolism
vox00720
Other carbon fixation pathways
vox01100
Metabolic pathways
vox01110
Biosynthesis of secondary metabolites
vox01120
Microbial metabolism in diverse environments
vox01200
Carbon metabolism
Module
vox_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vox_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vox_M00149
Succinate dehydrogenase, prokaryotes
vox_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LCH97_08430 (sdhA)
00650 Butanoate metabolism
LCH97_08430 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LCH97_08430 (sdhA)
00720 Other carbon fixation pathways
LCH97_08430 (sdhA)
Enzymes [BR:
vox01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LCH97_08430 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
HI0933_like
Thi4
FAD_binding_3
NAD_binding_7
Lycopene_cycl
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UDM18665
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All DBs
Position
complement(1772666..1774432)
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AA seq
588 aa
AA seq
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MTVPVRRFDAVIVGGGGAGMRAALQLSESGLKTAVLSKVFPTRSHTVAAQGGISASLGNV
QEDRWEWHMYDTVKGSDWLGDQDAIEFMCRKAPEAVIELEHFGMPFDRLENGKIYQRPFG
GHTQNNGETPVQRACAAADRTGHAMLHTLYQRNVRANTQFFVEWMALDLIRDEAGDVVGV
TALEMETGEVYIFHAKAVLFATGGAGRIYAASTNAFINTGDGLGMCVRAGIPLEDMEFWQ
FHPTGVAGAGVLITEGVRGEGGILLNANGERFMERYAPNLKDLAPRDFVARSMEQEVLEG
RGCGPNKDYVLLKLDHLGPDIIKQRLPGIREIAIKFAGVDPIKEPIPVIPTCHYMMGGIP
TNYRGEVVIPQGDNPEARVNGFYAAGECACASVHGANRLGTNSLLDLVVFGKSAGDSMVE
FIRNEMPTWKPLPANAAERSLARISRLDNQTNGEDVTEVRTAMQRTVQARAAVFRNSENL
ALGVKEIQEVAERVKRIQIKDKSKVFNTARVEALELENLIEVAVATLISADARKESRGAH
AHADFQQRDDEVWMKHTLYYGDDRRLTYKPVHTKPLSVDYIPPKERTF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgactgtacccgttcgtcgatttgatgcagtaattgttggcggcggcggcgcaggtatg
cgtgctgccctgcaactgtctgagtccggcctgaaaactgccgtactttccaaagtattc
ccgacccgctcgcacactgttgctgctcaaggtggtatctccgcctcgctgggcaacgtg
caggaagaccgctgggaatggcatatgtacgacaccgtaaaagggtcggactggctgggt
gaccaggatgccatcgaattcatgtgccgcaaggcaccggaagccgtgatcgagctggaa
cacttcggcatgccgttcgaccgtctggaaaacggcaagatttaccagcgcccgtttggc
ggccacacccagaacaacggcgaaaccccggttcagcgcgcctgtgccgctgccgaccgt
accggccatgccatgctgcacacgctgtaccagcgtaacgtgcgcgccaatacccagttc
tttgtcgagtggatggcgctggacctgatccgtgacgaagctggcgatgtggtgggtgtt
accgccctggaaatggaaaccggcgaggtttacattttccatgccaaagccgtgctgttt
gctaccggtggcgccggccgtatctacgccgcttccaccaacgccttcatcaacaccggt
gacggcctgggtatgtgcgttcgcgcaggcatcccgctggaagacatggaattctggcag
ttccacccgaccggcgtagccggtgccggtgtactgattaccgaaggtgtacgtggcgaa
ggcggtatcctgctgaacgccaacggcgagcgcttcatggagcgctacgcacctaacctg
aaagatctggccccgcgcgacttcgtggcccgctccatggagcaggaagtgctggaaggc
cgtggttgcggcccgaacaaggactacgtgctgctgaaactggaccatctgggcccggac
atcatcaaacagcgcttgccaggcattcgcgagattgccatcaagtttgccggcgtagac
ccgatcaaagagccgattccggttatcccgacttgccactacatgatgggcggtattccg
accaactaccgtggcgaagtggtgatcccgcaaggtgacaacccggaagcacgcgttaac
ggcttctatgccgccggcgaatgcgcttgcgcatccgtacacggtgccaaccgtctgggt
accaactccctgctggacctggtggtattcggcaaatcggccggcgacagcatggtcgag
ttcatccgcaacgaaatgcctacctggaaaccgctgccggccaacgccgccgagcgttcc
ctggcacgtatcagccgcctggacaaccagaccaacggcgaagacgtgaccgaagtacgt
accgccatgcagcgtaccgttcaggcacgtgctgccgtattccgtaactcggaaaacctg
gcactgggcgtgaaggaaatccaggaagtggccgagcgcgtaaaacgcatccagatcaag
gacaaatccaaagtcttcaacaccgcacgtgtcgaggcgctggagctggaaaacctgatc
gaagtggctgtggctaccctgatctccgccgatgcgcgtaaagagtcccgtggtgcccac
gcccacgctgacttccagcagcgcgacgacgaggtatggatgaagcacaccctgtactac
ggcgatgaccgtcgcctgacctacaagcccgtgcacaccaaaccgttgtcggtggattac
atcccgccgaaagagcgtactttctaa
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