Vogesella sp. XCS3: LCH97_09005
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Entry
LCH97_09005 CDS
T07617
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LCH97_09005 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vox01007
]
LCH97_09005 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vox03016
]
LCH97_09005 (aspS)
03029 Mitochondrial biogenesis [BR:
vox03029
]
LCH97_09005 (aspS)
Enzymes [BR:
vox01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LCH97_09005 (aspS)
Amino acid related enzymes [BR:
vox01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LCH97_09005 (aspS)
Transfer RNA biogenesis [BR:
vox03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LCH97_09005 (aspS)
Prokaryotic type
Other AARSs
LCH97_09005 (aspS)
Mitochondrial biogenesis [BR:
vox03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LCH97_09005 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UDM15467
LinkDB
All DBs
Position
complement(1903740..1905533)
Genome browser
AA seq
597 aa
AA seq
DB search
MRTDYCGLIDKKFLGQTVTVKGWAHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFKTA
DSARNEFVLSITGIVRERPAGTANSKMISGEIEILAKDIEILNTAATPPFQIDDENLSEN
VRLTNRVIDLRRPAMQKNLRLRYRVAMGVRNHLDKQGFIDIETPMLTRSTPEGARDYLVP
SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFL
NEDQIMDITENMAQEIFRDVMNVELGKFPRMTYGDAMFYYGSDKPDLRVSLKFTELTDVM
KSEEFKVFRGAADMANGRVVALRVPNGATLSRKEIDDYTQFVGIYGAKGLAYIKVNDVTK
LNEEGLQSPIVKFLSAAGLQAIIERTGAQNGDIIFFGADKAKVVNEAIGALRIKIGHERG
EKDGYFVREWRPLWVVDFPMFEHDEDADRWTACHHPFTSPKPGHEDLMDTDPGACLARAY
DMVLNGWEIGGGSVRIHRAEVQEKVFAALKISPEEQQNKFGFLLDNLKFGAPPHGGLAFG
LDRLVTLMAGAESIRDVIAFPKTQRAQCLLTNAPNAVDEKQLRELNLRLRQKAEPAA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgattattgcggacttatcgacaagaaatttctcggccagaccgttaccgta
aaaggctgggcccatcgtcgccgtgaccacggcggtgtgatcttcatcgacctgcgcgac
cgtgaaggtctggtacaggtggtgatcgatccggacaccccggaagcattcaagaccgcc
gatagcgcgcgtaacgaatttgtgctgtccattaccggtatcgtgcgcgagcgcccggct
ggcaccgccaacagcaaaatgatctccggcgagatcgagatcctggccaaggacatcgag
atcctgaacaccgcggccaccccgccgttccagatcgacgacgaaaacctgtccgagaac
gtgcgtctgaccaaccgtgtcatcgacctgcgtcgcccggccatgcagaaaaacctgcgc
ctgcgctaccgcgtggccatgggtgtgcgtaaccacctggacaagcagggcttcatcgac
atcgaaaccccgatgctgacccgctccaccccggaaggcgcccgcgactacctggtaccg
tcccgcgtgcatccgggcgaattcttcgcgctgccgcaatcgccacagctgttcaaacag
ctgctgatggtggccggtttcgaccgctactaccagatcaccaagtgcttccgtgacgaa
gacctgcgtgccgaccgccagccggaattcacccagatcgatatcgagacttcgttcctg
aacgaagaccagatcatggacatcaccgaaaacatggcgcaggaaatcttccgcgacgtg
atgaacgtagagctgggcaagttcccgcgcatgacctacggcgacgccatgttctactac
ggctccgacaagccggacctgcgcgtaagcctgaaattcaccgaactgaccgacgtgatg
aagtcggaagagttcaaggtattccgcggcgcggccgacatggccaatggccgcgtggta
gccctgcgcgtgccgaacggcgccaccctgtcgcgtaaagagatcgacgactacacccag
ttcgtcggcatctacggcgccaagggcctggcctacatcaaggtcaacgacgtcaccaag
ctgaacgaagaaggcctgcaatcgcctatcgtgaagttcctgtccgctgccggcctgcaa
gccatcatcgagcgtaccggtgcccagaacggcgacatcatcttctttggcgctgataaa
gccaaagtggtgaacgaagccatcggcgcgctgcgtatcaagatcggccacgagcgtggc
gaaaaagacggctacttcgtgcgcgaatggcgcccgctgtgggttgtcgacttcccgatg
ttcgagcacgacgaagacgccgaccgctggaccgcttgccaccacccgttcaccagcccg
aaaccaggccacgaagacctgatggacaccgacccgggcgcttgcctggcccgtgcctac
gacatggtgctgaacggttgggaaatcggcggtggttcggtacgtatccaccgcgccgag
gtacaggaaaaagtattcgccgcgctgaagatcagcccggaagagcagcagaacaagttc
ggcttcctgctggacaacctgaaattcggtgcgccgccgcacggtggcctggccttcggt
ctggaccgtctggtgaccctgatggccggtgccgagtccatccgcgacgtcatcgccttc
ccgaaaacccagcgtgcgcagtgtctgctgaccaacgcgccgaacgcggtagacgagaag
cagctgcgcgaactgaacctgcgcctgcgccagaaagccgagcctgccgcctaa
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