Vogesella sp. XCS3: LCH97_09550
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Entry
LCH97_09550 CDS
T07617
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00220
Arginine biosynthesis
vox00240
Pyrimidine metabolism
vox00250
Alanine, aspartate and glutamate metabolism
vox01100
Metabolic pathways
vox01110
Biosynthesis of secondary metabolites
vox01240
Biosynthesis of cofactors
Module
vox_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LCH97_09550 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LCH97_09550 (carB)
00220 Arginine biosynthesis
LCH97_09550 (carB)
Enzymes [BR:
vox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LCH97_09550 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UDM15573
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All DBs
Position
complement(2012254..2015463)
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AA seq
1069 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDM
ADVTYIEPITWQVVEKIIDKERPDAILPTMGGQTALNCALDLARNGVLEKYKVELIGATE
DAIDKAEDRGRFKEAMAKIGLSCPLSFVCHTMEESLEAQAKVGFPTLIRPSFTMGGSGGG
IAYNKEEFLAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDRNDNCIIICSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPDTGDMIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGATPASFEPSIDYVVTKIP
RFAFEKFPQADDRLTTQMKSVGEVMAMGRTLQESMQKALRGLETGLSGFDPRTTDEAAIR
HELGSPGPDRILSVADAFRIGLSRDEIFAISKIDPWFLAQIEDLMGEEKALAGRKVDSLS
YDELRRLKRKGFSDRRLGELLGTDQAAVRAHRWALKLHPVYKRVDTCAAEFATNTAYMYS
TYEEECESQPTDRKKVMVLGGGPNRIGQGIEFDYCCVHAALSLRESGFETIMVNCNPETV
STDYDTSDRLYFEPLTLEDVLEICRIEKPFGVIVQYGGQTPLKLARALEANGVPIIGTSP
DMIDAAEDRERFQHLLQDLGLKQPPNRTARNPVDAMRLAEEIGYPLVVRPSYVLGGRAME
IVHEPADLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDCISDGTDVVIGGIMQHIEQAG
VHSGDSACSLPPYSLSAELQDEIRRQTIAMARALNVVGLMNVQFAIQGSTIFVLEVNPRA
SRTVPFVSKVSGASLAMIAARAMAGISLKEQGFTSEVVPPYYAVKEAVFPFIKFPGVDTI
LGPEMKSTGEVMGVGRTFAEAYVKAQLAAGDKLPRTGKVFMSLREGDKEGGVEVARELQQ
LGFGVCATRGTAKALAAAGIIVQIVHKVNEGRPHIVDLIKNGEIDVVINTVDEKRQAIQD
SHTIRRSALQMRVPQYTTLAGAKAVCAGLSHVDAFDVYSVQQLHADLKG
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtactgatatcaagagcattctcatcattggcgctggcccgattgtcatc
ggccaggcctgcgagtttgactactccggcgcccaggcgtgcaaggcgctgcgtgaagaa
ggttacaaagtcattctggtgaactccaacccggccaccatcatgaccgacccggacatg
gccgacgtaacctatatcgagccgattacctggcaagtggtcgaaaagatcatcgataaa
gaacgcccggacgccatcctgccgaccatgggcggccagaccgcgctgaactgtgcgctg
gacctggcgcgtaacggcgtgctggaaaaatacaaagtcgagctgatcggtgccaccgaa
gacgccatcgacaaagcagaagaccgtggccgtttcaaggaagccatggccaagatcggc
ctgtcctgcccgctgtctttcgtgtgccacaccatggaagagtcgctggaagcccaggcc
aaggtgggcttccccacactgatccgcccgtccttcaccatgggcggctccggcggtggt
atcgcgtacaacaaggaagaattcctggccatctgcgaacgcggtttcgaagcctcgcca
acccacgaactgctgatcgagcagtcggtgctgggctggaaagagtacgagatggaagtg
gtgcgtgaccgcaacgacaactgcatcatcatctgctccatcgaaaacttcgacccgatg
ggcgtgcacaccggtgactccatcaccgtggcgccagcacaaacgctgaccgacaaggaa
taccagatcatgcgtaacgccagcctggcggtactgcgtgaaatcggtgtggataccggc
ggttccaacgtgcagtttgccgtgaacccggacaccggcgacatgatcgtgatcgagatg
aacccgcgcgtgtcgcgttcgtctgcgctggcatccaaagccaccggcttcccgattgcc
aagatcgctgccaagctggctgtgggctttaccctggacgaactgaagaacgacatcacc
ggcggcgcgaccccggcttcgttcgaaccgtccatcgattacgtggtgaccaagatcccg
cgtttcgccttcgagaaattcccgcaggctgacgaccgtctgaccacccagatgaagtcg
gtaggcgaagtgatggccatgggccgcacgctgcaggagtccatgcagaaagccctgcgc
ggcctggaaaccggcctgtccggcttcgacccgcgtaccaccgacgaagcggccatccgc
cacgagctgggctcccctggcccggatcgcatcctgtcggtagccgatgccttccgcatc
ggcctgagccgcgacgaaatctttgccatcagcaagatcgacccgtggttcctggcgcaa
atcgaagacctgatgggtgaggaaaaagcgctggccggccgcaaggtagacagcctgagc
tacgacgagctgcgtcgcctgaagcgcaaaggcttctccgaccgccgtctgggcgagctg
ctgggcaccgaccaggctgccgtacgtgcacaccgctgggcgctgaagctgcacccggtg
tacaagcgtgtggatacctgcgctgccgagtttgccaccaacaccgcctacatgtactcc
acctacgaggaagagtgcgaatcccagcctaccgaccgcaagaaggtgatggtgctgggt
ggcggcccgaaccgtatcggccagggtatcgagtttgactactgctgcgtacacgccgcg
ctgagcctgcgcgagtccggtttcgagaccatcatggtcaactgcaacccggaaaccgtg
tccaccgattacgacacctccgaccgcctgtacttcgagccgctgacgctggaagacgtg
ctggaaatctgccgtatcgaaaaaccgttcggcgtgatcgtgcagtacggcggccagact
ccgctgaaactggcgcgcgcgctggaagccaacggcgtgcctatcatcggcaccagcccg
gacatgatcgacgctgccgaagaccgcgagcgcttccagcacctgctgcaagacctgggc
ctgaaacagccgcctaaccgcactgcgcgtaacccggtggacgccatgcgtctggccgaa
gaaatcggctacccgctggtggtgcgcccgtcctacgtactgggtggccgcgcgatggaa
atcgtgcacgagcctgccgacctggaacgctatatgcgcgaagccgtgaaggtgtccaac
gacagcccggtgctgctggaccgcttcctgaacgacgccatcgaagtggacgtggactgc
atctccgacggtaccgacgtggtaatcggcggcatcatgcagcacatcgagcaagccggt
gtgcactccggtgactccgcctgctcgctgccaccttacagcctgtcggccgagctgcag
gacgagatccgccgccagaccatcgccatggcgcgtgcgctgaacgtggtgggcctgatg
aacgtgcagtttgccatccagggcagcaccatctttgttctggaagtgaacccgcgtgcc
tcgcgtaccgtgccgtttgtgtccaaggtaagcggtgcctcgctggcgatgatcgccgcg
cgtgccatggccggcatcagcctgaaagagcagggctttaccagcgaagtggtgccaccg
tactacgccgtgaaagaagccgtgttcccgttcatcaagttcccaggcgtggataccatc
ctggggccggagatgaagtccaccggcgaagtaatgggcgttggccgcacctttgccgaa
gcttacgtgaaagcccagctggcagccggcgacaagttgccgcgcaccggcaaggtgttc
atgtccttgcgtgaaggcgacaaggaaggtggcgtggaagtggcccgcgagctgcagcaa
ctgggctttggcgtatgcgccacccgtggcacggctaaagcgctggcggcagccggcatc
atcgtgcagatcgtgcacaaggtgaacgaaggccgcccgcacatcgtggatctgatcaag
aacggcgaaattgacgtggtgatcaacaccgtggacgaaaagcgccaggcgatccaggac
agccacaccatccgccgcagcgcgctgcagatgcgtgtaccacaatacaccaccctggct
ggtgccaaggcggtgtgtgccggcctgtcgcatgtggatgcttttgacgtgtacagcgtg
cagcagctgcacgccgatctgaagggctga
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