Vogesella sp. XCS3: LCH97_10595
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Entry
LCH97_10595 CDS
T07617
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCH97_10595 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vox03021
]
LCH97_10595 (rpoA)
03400 DNA repair and recombination proteins [BR:
vox03400
]
LCH97_10595 (rpoA)
Enzymes [BR:
vox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LCH97_10595 (rpoA)
Transcription machinery [BR:
vox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCH97_10595 (rpoA)
DNA repair and recombination proteins [BR:
vox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCH97_10595 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
Motif
Other DBs
NCBI-ProteinID:
UDM15762
LinkDB
All DBs
Position
complement(2231429..2232412)
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSASEFLKPRLIDVQPVSATHARVSMEPFERGYAHTLGNALRRILLSSMPGYAPTEVT
IAGVLHEYSALDGVREDVVDILLNLKGVVLKLHGRDSLILSLKKEGEGPVLAGDIELPHD
VEVINPDHVICYLSAGGKIDMEIKVEKGRGYQPVAARINHDDNRAIGTIQLDASFSPVRR
VSFNVESARVEQRTDLDRLVLDIETNGVIEPEEAVRLAARILVDQLSIFADLQGTAVEEV
VEKAPPIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGMKLENWPPAGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcgcttcggaatttctgaaaccgcgactgatcgatgtgcagccggtttcg
gctacacatgctcgtgtgtcgatggagccgttcgaacgcggctatgcccatactctgggt
aatgctctgcgtcgtattctgctctcttccatgccgggctatgctccgaccgaagtaaca
atcgctggcgttttgcatgagtattccgctcttgacggtgttcgggaagatgtcgtcgac
atcctcctgaacctgaagggcgtagtgcttaagctgcatggtcgtgacagcctgattctt
tccttgaaaaaggaaggtgaaggtcctgtcctggctggtgacatcgaactgccgcacgat
gtagaagtgatcaaccctgatcacgtaatctgctatctgtctgctggcggtaaaatcgat
atggaaatcaaggttgaaaaaggtcgtggctaccagccggtagctgcccgtatcaaccac
gatgacaatcgtgcgattggcactatccagcttgatgcttccttctccccggtgcgccgc
gtcagcttcaatgttgaaagcgcccgtgtagaacaacgtaccgaccttgaccgtctggta
ctggacatcgagactaacggtgtgatcgaaccggaagaagcggtacgcctggcggcccgt
attctggtagatcagctgtcgatctttgcagacttgcaaggtacagcagttgaggaagtc
gttgagaaggcgccaccgatcgatccgatcttgttgcgcccggtcgatgatctcgaactt
actgttcgttccgccaattgtctgaaggccgagaacatttactacatcggtgatctgatt
cagcgtacggaaaccgagctgctgaagaccccgaaccttggtcgtaagtcgctgaacgag
atcaaggaagttctcgcttctaaaggcctgacactcggcatgaagctcgaaaactggcct
ccggctggcctcgagaagccgtaa
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