Vogesella sp. XCS3: LCH97_10905
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Entry
LCH97_10905 CDS
T07617
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vox03400
]
LCH97_10905
Enzymes [BR:
vox01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LCH97_10905
DNA repair and recombination proteins [BR:
vox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LCH97_10905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
UDM15815
LinkDB
All DBs
Position
complement(2277742..2279265)
Genome browser
AA seq
507 aa
AA seq
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MQLRLILGDQLNAAHSWYRERRDDVVYVLMETRSETDYVRHHAQKVLAVFAAMRRFAEAL
QAAGHSVHYLHIGDAANRHDFAANLAWLAAQYGATSLACQLADERRVDALLAALPQQLGL
PLTQVDSEHFYTTRDEAARLFGSKGWRMETFYRRMRQQHSVLLDAAGKPEGGQWNYDAAN
REPYRGEVALAPWPFAAHDLSALWQEMVDAGVQTLGAPRPDALPWPLTRREARAWLADFL
QQRLRHFGRYQDALVHGEAWLFHSGLSFVLNTKMLSPHEVVHAAEAAWRSDPTLPLSSVE
GFIRQILGWREYVRGVYWARPDFGSVNALQHQRPLPRWFWDGDTGMACVAQAVQGSLQHA
YAHHIQRLMVTGNIALLLGCHPDEVDAWYLGIYIDAFEWVEQPNTRGMSQWADGGFMASK
PYVSGGAYLARMGDHCAQCRYVVKQKTGPGACPFNSLYWHFLARHEAKLAANPRLAMPYA
SWRKMDEGARQALLAQAEAYLQDVDSL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgcctgattctgggcgaccagctcaacgctgcccacagctggtaccgcgaa
cgccgcgacgacgtggtgtacgtgctgatggaaacgcgcagcgaaaccgactacgtgcgt
caccacgcgcagaaggtgctggccgtgtttgccgccatgcgccgctttgccgaggcgctg
caggcggctggccacagtgtgcactacctgcacattggcgatgcggccaaccgccacgat
tttgccgccaacctggcgtggttggccgcgcagtatggcgccaccagcctggcctgccag
ctggccgacgagcgccgtgtcgatgcgctgctggccgcgctgccgcaacagcttggcctg
ccgctgacgcaggtagacagcgagcatttctacaccacccgtgacgaggcggcgcggctg
ttcggcagcaagggctggcgcatggaaaccttctacaggcgcatgcgccagcagcacagc
gtgctgctggacgccgccggcaagccggagggcgggcagtggaactacgatgcggccaac
cgcgagccttaccgcggcgaggtggcgctggcaccgtggccgtttgccgcccatgacctg
agcgcgttgtggcaagagatggtcgatgccggcgtgcagacgctaggtgccccccggcca
gacgccttgccgtggccgctgacacggcgcgaggcgcgcgcctggctggccgatttcctc
cagcagcggctgcgccattttggccgctaccaggacgcgctggtgcacggcgaggcctgg
ctgtttcacagcgggctgagctttgtgctgaataccaaaatgctgtcaccgcacgaggtg
gtacacgccgcggaagccgcctggcgtagcgacccgacgctgccgctctctagcgtagag
ggttttatccgccagattctgggctggcgtgaatacgtacgcggcgtgtattgggcacga
ccggatttcggtagcgttaatgcgctgcagcatcagcggccgctgccgcgttggttctgg
gacggcgataccggcatggcctgcgtggcgcaggcagtgcagggtagcctgcagcacgct
tacgcccaccatatccagcgcctgatggtcaccggcaatatcgcgctgctgctgggttgc
catccggacgaggtagacgcctggtacctgggcatctacatcgatgccttcgagtgggtg
gagcagcccaatacgcgtggcatgagccagtgggcggacggcggcttcatggccagcaaa
ccgtacgtgtcgggcggtgcgtacctggcacgcatgggcgaccactgtgcgcagtgccgc
tacgtggtaaagcagaaaaccggccccggtgcctgcccgttcaacagcctgtactggcac
tttctggcgcggcacgaggccaagcttgcggccaacccccggctggcgatgccgtacgcc
agctggcgcaagatggacgagggtgcccgccaggcgttgttggcgcaggccgaggcctat
ttgcaggacgtggacagcctgtag
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