Vogesella sp. XCS3: LCH97_11080
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Entry
LCH97_11080 CDS
T07617
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
vox
Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vox03009
]
LCH97_11080
Enzymes [BR:
vox01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LCH97_11080
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LCH97_11080
Ribosome biogenesis [BR:
vox03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LCH97_11080
23S rRNA modification factors
LCH97_11080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_24
Methyltransf_11
Methyltransf_31
DUF7384
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UDM15850
LinkDB
All DBs
Position
2312583..2313344
Genome browser
AA seq
253 aa
AA seq
DB search
MKRVDLLLVEQGLAPSRTAAQQLIEAGRVSVAEGAGTRLIGKASQKLPDDAVFHVVPDEA
DRYVSRGGLKMAGALAAAGLHDIQGWRALDVGQSTGGFSDCLLQAGACRVVGVDVGHDQL
AARLRNDARVRYFEGVNARALDHAALLAANDGEAFDLMVCDVSFISVALIYPSALPLIRP
GGYLLSLVKPQFEVGREGLGHGGIVRDSSLYAGVEDKISRCVAELGFDKLGWFDSPIKGG
DGNHEFFILARRR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtggatcttcttttggtagaacagggcctggccccgtcgcgtacggcagca
cagcagctgatcgaggctggccgcgtcagcgtggctgagggtgccggcacgcgccttatc
ggcaaggccagccagaaactgcccgacgatgcggtattccatgtggtgccggacgaagcc
gaccgctacgtgtcgcgtggcgggctgaaaatggccggtgcgctggcggccgccggtctg
cacgatatccagggctggcgtgcgctggacgtggggcaatccaccggtggctttagcgac
tgcctgctgcaagccggcgcgtgccgtgtggtgggtgtcgatgtgggccacgaccagttg
gccgcacgcctgcgcaacgatgcgcgcgtacgctatttcgaaggggtgaatgcccgcgcc
ctggaccacgcggctctgctggcggccaacgatggcgaagccttcgacctgatggtatgc
gatgtatcgtttatttctgtggcgctgatctacccgtcggctctaccgctgatccggccg
ggcggctatctgctcagcctggtaaaaccgcagttcgaggttggccgcgaggggctgggg
cacggtggtatcgtgcgtgatagctcgctatacgccggtgtggaagacaagatcagccgc
tgcgtggccgagctgggctttgacaagctgggctggtttgacagcccgatcaagggcggc
gacggcaaccacgaatttttcatcctggcgcgccgccgctag
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