Vogesella sp. XCS3: LCH97_11270
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Entry
LCH97_11270 CDS
T07617
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00470
D-Amino acid metabolism
vox00550
Peptidoglycan biosynthesis
vox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LCH97_11270 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LCH97_11270 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vox01011
]
LCH97_11270 (murD)
Enzymes [BR:
vox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LCH97_11270 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vox01011
]
Precursor biosynthesis
Amino acid ligase
LCH97_11270 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Sacchrp_dh_NADP
DAO
KR
Pyr_redox
F420_oxidored
NAD_binding_7
TrkA_N
Pyr_redox_2
Shikimate_DH
AlaDh_PNT_C
Pyr_redox_3
2-Hacid_dh_C
NAD_binding_2
XdhC_C
3HCDH_N
VpsR
Motif
Other DBs
NCBI-ProteinID:
UDM18776
LinkDB
All DBs
Position
complement(2353504..2354868)
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AA seq
454 aa
AA seq
DB search
MRFDNRHIIVIGLGDTGVSAARWLLAHGARVTIADSRDNPANAANVAAELGVTLRLGAFD
AQTFADADMLMVSPGVSIRTPAIADFARRGGEVVGDVELWARAIAGSGAKVIAITGSNGK
STVTSLVGHLCEAAGQDTVVCGNIGLPVLSALAEREAAGKQPDVWVVELSSFQLETTTSL
RADAATVLNISEDHLDRYHDLLDYAHSKTAIFAGSGVQVLNRDDVFCRAMVRAGRHVAWF
SLREAADYALQQTDGRYLLTIAGSPVFDSADMQLQGLHNAANALAALALTEAIALPREAL
LAALRSFRGLAHRVEYVDEFGGVMFIDDSKGTNVGATEAALNGMTRPVVLIAGGDGKGQD
FAPLAPACQRIARAVVLIGRDAPAIHAALAGCRVPLHRCSTLEEATRLAASLAQTGDVVL
LSPACASLDMFKNYAHRAQVFVDTVAAVKAEITA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcgacaaccgccacatcatcgttatcggcctgggcgacaccggcgtttctgcc
gcgcgctggctgctggcgcatggcgcgcgcgtcaccattgccgatagccgcgacaacccc
gccaatgcggccaacgtggccgccgagctgggcgtgaccctgcgcctgggtgcttttgat
gcgcagacctttgccgacgccgacatgctgatggtaagccccggcgtcagcatccgtacc
ccggccattgccgactttgcccgccgtggtggcgaggtagtgggggatgtagagctgtgg
gcgcgcgccatcgccggcagcggtgccaaggttatcgccattaccggctccaacggcaag
agcaccgtcaccagcctggtaggccacctgtgcgaggccgccggccaggacaccgtggtg
tgcggcaatatcggcctgccggtgctgtctgcgctggccgaacgcgaagccgccggcaaa
cagcccgacgtgtgggtggtagagctgtccagcttccagctggaaaccaccaccagcctg
cgcgccgacgcggccacggtactgaatatttccgaagaccatctggaccgttaccacgat
ctgctggactacgcgcacagcaagaccgccatttttgccggtagcggtgtacaggtgttg
aaccgcgacgatgtgttctgccgcgccatggtgcgcgccggccgccatgtggcctggttc
tcgctgcgcgaggccgcagattacgcactgcaacagacggatggccgctatctgcttact
atcgccggctcgccggtgttcgatagcgccgacatgcagctgcaaggcttgcacaatgcg
gccaacgcgctggcagcgctggcgctgaccgaagccatcgcgttgccgcgcgaagccttg
ttggccgcattgcgcagtttccgtggcttggcgcaccgggtggaatacgtggacgagttc
ggtggtgtgatgttcatcgacgactccaaaggtaccaatgtgggtgccaccgaggcggca
ctgaacggcatgacccggccagtagtactgattgccggtggcgatggcaaaggccaggat
tttgcgccgctcgcgccggcctgccagcgcattgcccgcgccgtggtgctgatcggccgt
gacgcgccggccatccatgccgcgctggccggctgccgcgtaccgctgcaccgctgcagc
acactggaagaagcaacccgtctggcggctagcctggcacaaaccggtgacgtggtattg
ctgtcgcccgcctgcgccagcctggatatgttcaagaactatgcacaccgtgcccaggta
tttgtcgatacggtggcggcagtcaaggcggagatcacagcctga
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