Vogesella sp. XCS3: LCH97_11685
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Entry
LCH97_11685 CDS
T07617
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00521
Streptomycin biosynthesis
vox00523
Polyketide sugar unit biosynthesis
vox00525
Acarbose and validamycin biosynthesis
vox00541
Biosynthesis of various nucleotide sugars
vox01055
Biosynthesis of vancomycin group antibiotics
vox01100
Metabolic pathways
vox01110
Biosynthesis of secondary metabolites
vox01250
Biosynthesis of nucleotide sugars
Module
vox_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCH97_11685 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCH97_11685 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LCH97_11685 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCH97_11685 (rfbB)
00525 Acarbose and validamycin biosynthesis
LCH97_11685 (rfbB)
Enzymes [BR:
vox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LCH97_11685 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
UDM15960
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All DBs
Position
complement(2437775..2438836)
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AA seq
353 aa
AA seq
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MTILVTGGAGFIGGNFVLDWLDADDETVVNLDKLTYAGNLQTLASLQGSPRHVFVQGDIG
DRELVAGLLAQYQPRAVLNFAAESHVDRSIHGPGDFIHTNVLGTFNLLESVRAYWSELPA
EAKQAFRFLHVSTDEVYGTLSPQDPPFAEDNRYEPNSPYSASKAASDHLVRAWHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGQQVRDWLYVKDHCSAIRRVLE
AGKLGETYNVGGWNEKANLEVVHTICTLLDELRPSADGQPYASQITYVQDRPGHDRRYAI
DARKLERELGWKPAETFDSGIRKTVQWYLDNQDWVAGVTSGSYRDWLNQQYGA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacaattctggtgaccggcggtgctggctttattggtggcaacttcgtgctggactgg
ttagacgcagacgatgaaaccgtggtcaatctggacaaactgacctacgccggcaacctg
caaacgctggccagcctgcagggcagcccgcgccacgtgtttgtacagggtgatattggc
gaccgcgagctggtggctggtttgctggcgcaataccagccgcgtgccgtgctgaacttt
gctgccgaaagccacgtggatcgttccatccatggcccgggcgattttatccacaccaat
gtgctgggtacgttcaacttgctggagtcggtgcgcgcttattggagcgaattgcctgca
gaggcaaagcaagcgttccgtttcctgcacgtgtccaccgacgaggtatacggcacgctg
tcgccacaagacccgccgtttgccgaagacaaccgctacgagccgaacagcccgtattcg
gccagcaaggcagccagcgaccatttggtacgcgcctggcaccacacctacggcctgccg
gtgctcaccaccaattgcagcaacaactacggcccgtaccacttccccgagaagctgatt
ccactggtcatccttaatgccctggccggcaagccactgcctatctatggcgatggccag
caagtacgcgactggttgtacgtgaaagaccactgcagcgccatccgccgcgtgctggag
gcgggcaaactgggcgaaacctataacgtaggtggctggaacgaaaaagccaacctggag
gtggtacacaccatctgcacgctactggacgagctgcgcccgagcgcggacggccagccc
tacgccagccagattacctacgtgcaagaccgccccggtcacgaccgccgctacgctatc
gatgcacgcaaactggaacgcgagctgggctggaagccggcggaaaccttcgatagcggt
atccgcaagacggtgcagtggtatctcgataatcaggactgggtggccggcgtcaccagc
ggcagctaccgcgactggctaaaccagcagtacggagcctga
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