Vogesella sp. XCS3: LCH97_12095
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Entry
LCH97_12095 CDS
T07617
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
vox
Vogesella sp. XCS3
Pathway
vox02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LCH97_12095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vox02000
]
LCH97_12095
Transporters [BR:
vox02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LCH97_12095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
UDM16034
LinkDB
All DBs
Position
complement(2524709..2527789)
Genome browser
AA seq
1026 aa
AA seq
DB search
MMNISELCIRRPVMTVLLCLSLIIGGLLALQRIPIAALPSYETPTINVSASLPGASPQTM
ASSVATPLEKQFATIPGVAVISSSSSQGSTSVTLEFEPGRNLDGAALDVQAALLRAQRSL
PDEMTSLPSYRKVNPADAPILLLALNSPALSLTQLNDYVDSLVSPTLSTINGVAQVQIFG
QKRYAVRVKADPQRLAARNLTLDEVATALRAANGNTPLGTLEGPSQVLTIQSDSQLKSAA
EFAAMAVGNRNGSVVRLADVATVEDSIENLKTGSWVNGERSIVLAVFRQSDANTVAVVDA
IRAMLPKLESQLPGSVRMTPLSDRSDAIREAVHDVNLTMLLTVALVIMVIFMFLQRMAAT
LIPALTLPISLIGTLGLMYLMGYSIDNISLLGLTLAVGLVVDDAIVVLENIVRYMEEGDD
AMTAALKGSREIAFTIVSISLSLVAIFIPIFYMDGVIGLLFHEFAVVVSLAILVSAVASL
TLIPLLASRFLRRDHMPHHADAGQGHAIARAFERGFDALLAAYERTLDAALRHSRLTLLV
ALGTVAGSAWMFHAIPKGFFPVEDTGQVSINTEVPQDVSYDRLAALQARAATIVQQSPHV
AAVTSSVSGSGGRMFVTLKPRGQRGKIDQVVDDLRKDLRKVNGLSAAINPVQNLRLGGRS
SKSRYQYVLQSVDSSSLYDWGEKLERAMRKDSLFQDVNSDAQRKGLQAELRIDRDKAAQL
GVGMQAIRTALYTAFGQRQVATIYTDNDNYSVLLQLDDSQRVNEYDLTRLYVRGSGSELV
PLTSVASIQRTVGPVSISHQGQLPAVTLSFNLPPGVALGEVDARLKAMQQEIGLPASVFT
SYAGDAAAFAESQSSQTTLLLVALLVIYVLLGVLYESYIHPLTILAGLPSAAMGALGALM
LLNQELTIIASIGILMLIGIVKKNAIMMIDFALVAQREQGMSPQQAIRTACLLRLRPILM
TTLAAMMGALPIALALGAGAELRQPLGVAVVGGLLFSQLVTLYITPVLYLWFDGLAARVG
RKVAAG
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatatttccgagctctgtatccgccgcccggtgatgacggtgctgctgtgcctg
tcgctgattatcggcggtttgttggcgctgcagcgcatccccatcgccgcgctgcccagc
tacgagacgcccaccatcaacgtgtcggccagcctgccgggtgccagcccgcagaccatg
gccagctcggtggcgacgccgctggaaaaacagttcgccaccattcccggtgtcgcggta
atcagctccagcagtagccagggcagcacctcggtgacgctggagttcgagcccgggcgt
aatctggacggtgccgcgctggacgtgcaggccgccttgctgcgcgcgcagcgcagcctg
ccggacgagatgaccagcctgccgtcctaccgcaaggtgaaccctgccgacgcgcctatt
ttgctgctggcgctgaattcgccggcgctgtcgctcacccagctaaacgactatgtggac
agcctggtgtcgcccacgctgtctaccatcaacggcgtggcccaggtgcagatctttggc
cagaagcgctacgcggtgcgggtaaaggccgacccgcaaaggttggccgcgcgtaacctg
acgctggacgaggtggccaccgccctgcgtgcggccaacggcaatacgccgctgggcacg
ctggaaggcccgtcgcaggtgctcaccatccagtccgacagccagctcaagagcgccgcc
gagtttgccgccatggcggtgggtaatcgtaatggcagcgtggtgcgcctggccgacgtg
gccacggtggaagacagcatcgagaacctgaagaccggcagctgggtgaacggcgaacgc
tccatcgtgctggcggtgttccgccagtccgacgccaacaccgtggcggtggtggacgcc
atccgcgccatgctgcccaagctggaaagccagctgccaggctcggtgcgtatgacacca
ctgtccgaccgctccgatgctatccgcgaggcagtgcacgacgtgaacctcaccatgctg
ctgacggtagcactggtgatcatggtgatcttcatgttcctgcagcgtatggccgccacg
ctgataccggcgctgacgctgccgatttcgctgatcggtacgctgggcctgatgtacctg
atgggttattccatcgataacatctcgctgctgggcctgacgctggcggtgggcttggtg
gtggacgacgccatcgtggtgctggaaaacatcgtgcgctacatggaggagggcgacgac
gcgatgacggcggcgctgaaaggctcgcgcgagatcgcgttcaccatcgtcagcatttcg
ctgtcgctggtggctatcttcatccccatcttttacatggatggcgtgatcggcctgctg
ttccacgaatttgccgtggtggtgtcgctggccattctggtgtcggcggtggcgtcgctc
acgctgattccgctgctggcctcgcgctttttgcgccgcgaccacatgccgcaccacgcc
gacgccggccagggtcacgccattgcccgtgcgtttgagcgcggtttcgatgcgctgctg
gcggcctacgagcgcacgctggacgccgcgctgcgccacagccggctgacattgctggtg
gcgctgggcaccgtggccggttcggcgtggatgttccacgccattcccaagggctttttc
ccggtagaggacaccgggcaggtcagcatcaataccgaggtgccgcaggatgtgtcctac
gacaggttggccgcactgcaggcgcgcgcggccaccatcgtgcagcaaagcccgcacgtg
gcagcggtgacgtcgtcggtgagcggcagcggcgggcgcatgttcgtcacgctgaagcca
cgcggccagcgcggcaagatcgaccaggtggtggacgacctgcgcaaggacctgcgcaag
gtgaacggcctgagcgcggcgatcaacccggtgcagaacctgcgcctgggcggccgcagc
agcaagagccgctaccagtacgtgctgcagagcgtggacagcagcagcctgtacgactgg
ggcgagaagctggagcgcgccatgcgcaaggacagcctgttccaggacgtgaacagcgac
gcgcagcgcaagggcttgcaggccgagctgcgtatcgaccgcgacaaggcggcgcagctg
ggggtgggcatgcaggccatccgcaccgcgctgtacaccgcctttggccagcgccaggta
gccaccatctacaccgacaacgacaactactcggtgctgctgcagctggacgatagccag
cgtgtgaacgagtacgacctcacccgcctgtacgtgcgcggcagcggtagcgagctggtg
ccgctgaccagcgtggccagcatccagcgtaccgtggggccggtatcgatcagccatcag
ggccagctgccggcggtgacgctgtcgttcaacctgccgccgggcgtggcgctgggcgag
gtggacgcgcgcctgaaagccatgcagcaggaaatcggcctgccggccagcgtgtttacc
agctacgccggcgacgccgcggcgtttgccgagtcgcaaagcagccagaccacgctgctg
ctggtggccttgctggtgatctacgtgttgctgggcgtgctgtacgaaagctacatccac
ccgctcaccatcctggccggcctgccgtcggcggccatgggtgctttgggcgcgttgatg
ctgctgaatcaggagctgaccatcatcgccagcatcggcatcctgatgctgatcggtatc
gtgaagaaaaacgccatcatgatgatcgactttgcgctggtagcgcagcgcgagcagggc
atgagcccgcaacaggccatccgtaccgcctgcctgctacgcttgcgccccatcctgatg
accacgctggccgccatgatgggcgcgctgccgattgcgctggcgctgggtgccggcgcc
gagctgcgccagccgctgggtgtggcggtagtgggcggcctgctgttctcgcagctggtg
acgctgtacatcaccccggtgctctacctgtggtttgacggcttggccgctagggttggc
cgcaaggtagcggctggctaa
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