Vogesella sp. XCS3: LCH97_13235
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Entry
LCH97_13235 CDS
T07617
Name
(GenBank) DEAD/DEAH box helicase
Organism
vox
Vogesella sp. XCS3
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
TilS
DUF7172
DUF7195
Motif
Other DBs
NCBI-ProteinID:
UDM16248
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Position
2766569..2770699
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AA seq
1376 aa
AA seq
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MTALSIDFTLDTLPAHTMAVLHALALLPSGESKAALLALLQLNLIRDEHGKAVNGDKLGV
ILGDLEHRGAIVRTAGLPYRIAPPARNAVLLQLMGEQGELSAWAELLCEHLPLPRNQWDV
PGATAIQLRLWLAILQGKAEPTQQWLAQYQQLMQAGGATPQPPFKRLFANAAGRQLFDRL
DDDIQVLLLQDYLPDANWRLDHFAEGYRYALSRLDDGYRDWDDLTAQLLLQGIWRADFEL
VRQPGAEGDGLPVARLCYLPVLQGRFAEALSMLDDWLADIRAQTKKRTVDLPAPLNAFYC
LALIGSQDKARQPQLKQAIASAIKQRYGHSYYVLQHLLLLQEGTALSAKLQLPDASALSG
MDGLLLALAAFWLDVNQARTPAWQAALASFRDQMFEEGYVWVAEELAALLERQFAERRAH
PRWHAERGLIPLVAAYQRQEAWQHALNALKLLGAGKSPEGKANVDSKQTRLAWLLTLAPH
GALLEPREQKLGAKSQWSKGRAVALRRLLDEPESFDYLQEQDRQLLRYIRSHHDQHHYSS
NSAWELDAEKALPFLVGHPAMFWGDAPDVHIDVVAGSVALQLQERDGQIRLRLSPAKITA
DSEVVWEKDTPTRLMVYSVSREVRQIAAILGRELTVPVAAKAQLVEAVTSIAPLVPIHSD
LPELAANVDAVPADGTLYAHLLPLAQGLRMQLLVRPLPGGSWSRPGQGLETIVGELDGRT
VQTQRRLKAEKAALQKVLDACPGLAAAESDGQEWQLPDPQSALQVLSELQALDASLLACV
WPEGERMRIKGRRGLPQLAMGLKQQGDWFVLNGQLKLDDGRVLQLKELLALVQNQPGRFL
QLGDEDWLALTDVMKKRLDELALLADHVGKDGVYLSALNAPLLAELAGEVGEFDADDAWQ
QQLAALESLRDYQPQVPSTLQATLRDYQQEGYAWMSRLARWGVGACLADDMGLGKTVQTL
ALLLERAPDGPQLVVAPTSVALNWIAEAARFAPTLKVRAYQQQRTLVGLDAMDLVIVSYG
LLQQDADAFATVPWQTVVLDEAQAIKNAGTKRSQAAMNLQAGFRLAASGTPVENHLGELW
NLFRFVNPGLLGSQERFAQRFATPIERGDKNARRALKQLIQPFILRRTKTQVLDELPPRT
EITRKVPLSADELHLYEAMRQQAVEKLDELQGEDGKQMQVLAEITRLRRFCCHPKLALPD
STLSGSKLAAFADIADELLENGHKALVFSQFVDHLAIVRQLLDERGVRYQYLDGATPARE
RKARVDAFQKGDGDIFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAYRMGQQ
RPVTIYRLVAEHTIEEQIVELHHAKRDLADSLLSGGDISAKLDAEALLALLKGDAA
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgctttccatcgactttacgctggacaccctgcccgcccacaccatggccgtg
ctgcacgcgctggccctgctgccctcgggtgagtccaaggccgccctgctggcgctgctg
cagctgaacctgatccgcgacgaacacggcaaggccgtgaacggcgacaaactgggtgtg
attctgggcgacctggaacaccgtggtgccattgtgcgcaccgccggcctgccctaccgc
attgccccgcctgcccgcaacgccgtattgctgcagctgatgggcgaacagggcgagctg
tctgcctgggccgagttgctgtgcgaacacctgccgctgccgcgtaaccagtgggacgtc
cccggcgccaccgccatccagctgcgcttgtggctggccattttgcagggcaaggccgag
cctacccagcagtggctggcgcagtaccagcagctgatgcaggccggtggcgccacgccg
cagccgccgttcaagcgcctgttcgccaacgccgccggccgccagctgttcgaccgcctg
gacgacgacatccaggtattgctgctgcaagattacctgcccgatgccaactggcggctg
gaccactttgccgaaggctaccgctacgcgctgtcgcggctggacgatggctaccgcgac
tgggacgacctcaccgcccagctgttgttgcaaggtatctggcgggccgatttcgagctg
gtgcgccagcccggtgccgaaggcgacggcctgccggtagcgcggctgtgctacctgccg
gtactgcaaggccgctttgccgaggcgctgtccatgctggacgactggctggccgacatc
cgcgcgcaaaccaaaaagcgcacggtagacctgcccgcgccgctcaacgccttttactgc
ctggcgctgatcggcagccaggacaaagcccgccagccgcagctcaagcaggccatcgcc
agcgccatcaagcagcgctacggccatagctattatgtgttgcagcacttgctgctgctg
caggagggaaccgcgctatcggccaagctgcagctgccggatgccagcgccctgtcgggc
atggatggcctgctgctggcgcttgccgcgttctggctggacgtgaaccaggcgcgtacc
ccggcctggcaggcggcgctggccagcttccgcgaccagatgtttgaagaaggctatgtc
tgggtggccgaagagctggccgccctgctggagcgccagtttgccgaacgccgcgcccac
ccgcgctggcacgccgagcgaggcctgatcccgctggtagccgcctaccagcgccaggaa
gcctggcaacacgcgctcaatgcgctgaagctgctgggtgccggaaaatcccccgaaggc
aaggcaaacgtggatagcaaacaaacccggctggcgtggctgctcacgctggccccgcac
ggcgccctgctggagccgcgcgaacagaagctgggtgccaagagccagtggagcaaaggc
cgtgccgtggcgctgcgccgcctgctggacgagccggaaagctttgattacctgcaagag
caggaccgccagctgctgcgctacatccgcagccatcacgaccagcatcattactccagc
aacagtgcctgggagctggacgccgaaaaggcgctgcccttcctggtaggccacccggcc
atgttctggggtgatgcgccggatgtgcacatcgacgtggtggccggcagcgtggcgctg
cagctgcaagagcgcgacgggcagatccgcctgcgcctgtcgccagccaagatcaccgcc
gatagcgaagtggtgtgggaaaaagacacccctacccggctgatggtgtacagcgtcagc
cgcgaggtgcgccagatcgctgccattctggggcgcgagcttaccgtgccggtggcggcc
aaggcgcagctggtggaggccgtcaccagcatcgccccgctggtgcccatccactccgac
ttgcccgagttggccgccaatgtggacgcggtaccggccgatggcacgctgtacgcccac
ctgctaccgctggcgcagggcctgcgcatgcagctgttggtacgcccgctgccaggtggc
agctggagccgcccgggccagggcctggaaaccatcgtgggcgagctggatggccgcacg
gtacagacccagcgccgtctgaaagccgaaaaagcggcgctacaaaaagtactggacgcc
tgccctggcctggctgcggccgaaagcgacggccaggaatggcagctgccggacccgcaa
agcgcgctgcaagtgctgtccgagctgcaagcgctggacgccagcctgctggcctgtgtg
tggccggaaggcgaacgcatgcgcatcaagggccgccgtggcctgccgcagctggccatg
ggcctgaaacagcaaggcgactggtttgtgctgaatggccagctcaagctggacgacggc
cgcgtgctgcaactcaaggagctgctggcgctggtgcaaaaccagccggggcgcttcctg
cagctgggcgacgaagactggctggcgctgaccgacgtcatgaaaaagcgcctggacgag
ctggccctgttggccgaccacgtgggcaaggacggcgtttacctgtcggccctgaacgcc
ccgctgctggccgagctggccggcgaggtgggcgaattcgacgccgacgacgcctggcag
caacagttggccgcactggaaagcctgcgtgattaccagccgcaggtgccgtccacgctg
caagccacgctgcgcgactaccagcaggaaggctacgcctggatgtcgcgcctggcgcgc
tggggtgtgggtgcctgtctggccgacgatatgggcctgggcaagaccgtgcaaactctg
gccctgttgctggagcgcgcaccggatggcccgcagctggtggtggcaccgacctcggta
gcgctgaactggatcgccgaagccgcgcgctttgcccccacgctgaaagtgcgcgcctac
cagcagcagcgcacgctggtggggctggacgccatggatctggtgatcgtcagctacggc
ctgctgcagcaagacgccgacgcctttgccaccgtgccgtggcaaaccgtggtgctggac
gaggcgcaagccatcaagaacgccggcaccaagcgctcgcaagccgccatgaacctgcag
gccggcttccgtctggctgccagcggcaccccggtagaaaaccacctgggcgagctgtgg
aacctgttccgctttgtgaaccccggcctgctgggcagccaggaacgctttgcgcagcgc
tttgccacccctatcgagcgcggcgacaagaacgcccgccgcgcgctgaagcagctgatc
cagccgtttatcctgcgccgtaccaaaacccaggtgctggacgagttgccgccgcgtacc
gaaatcacccgcaaggtaccgctgtcggcagacgagctgcacctgtacgaagccatgcgc
cagcaagcggtagaaaagctggacgagctgcagggcgaggacggcaagcagatgcaggta
ctggccgagatcacccgcctgcgccgcttctgttgccaccccaagctggccttgccggat
tccacgctgtccggcagcaagttggcggcctttgccgatatcgccgacgagctgctggaa
aacggccacaaggcgctggtgttcagccagttcgttgaccatctggccatcgtgcgccag
ctgctggacgagcgcggcgtgcgctaccagtacctggacggtgccaccccggcgcgcgag
cgcaaggcacgggtcgacgcgttccagaaaggtgacggcgacattttcctgatcagcctg
aaagccggcggcaccggcctgaacctgacggcggccgactacgtgatccatctggacccg
tggtggaacccggcagtggaagaccaggccagcgaccgcgcttaccgcatgggtcaacag
cgcccggtgaccatctaccgcctggtggccgagcacaccatcgaagaacagatcgtggag
ctacaccacgccaaacgtgacctggccgacagcctgctgtccggtggtgacatcagcgcc
aagctggacgccgaagccctgctggcgctgctgaagggggacgccgcgtag
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