Vogesella sp. XCS3: LCH97_15230
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Entry
LCH97_15230 CDS
T07617
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LCH97_15230 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vox03400
]
LCH97_15230 (recC)
Enzymes [BR:
vox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LCH97_15230 (recC)
DNA repair and recombination proteins [BR:
vox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCH97_15230 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UDM16629
LinkDB
All DBs
Position
3198889..3202065
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AA seq
1058 aa
AA seq
DB search
MPLNLYQSNRLEALGILYSHLTDSPLADAFAPEVIMVQSRGMGRWLTLNLAQQRGLAANL
EFVLPAGFGWRLMQAVLPELPPKSAFAPDVLCWRLMDVLPTLAGEPFIPLQRYLQGGELA
CFELAGKIADIYDQYLVFRPDWIRAWEAGRLLGLGEDEAWQAALWQRLAAEVPGRHRVMM
LDDFFARLRSEHLPQRVSVFGIATLAPMYLALLQRMAELTEVNVFLLNPSEAYWGDLQAR
SRQAMLFDDDASAGGHPLLASLGQQGRDFFDELAGGVAQPMSAFMAPDGHSLLARLQHDI
LTLTPPAANVAPYRAGDASIRCHIAHSPMRELEVLKDQLLAMLAADPSLTPADIAVLTPD
INAYAPYIDAVFGYRSDAPSIPYSIADRRLAREVPLLATFGAVLQLADSRFAASDVLALL
DCPALLARFGLADDDVSLLAQWVRQAGIRWGRDAEHKARLGLPAEPTHTWRWGLDRLLLG
TMLPASLAGDGAPLFAGLLPDSAAQGQAADKLASLASLYDVLAGLAADWAQPASMAGWAQ
RLRDAAAQLFLVDEADEAALQLLHGIADTLTADASLAQFDGALPLAVIRDAVLRQLDMSS
SGGFLTGGLTFCAMVPMRSIPFRVLCLVGMNDGAYPRDERPVSFDLVARNPRRGDRSRRF
DDRYLFLEAILSARDALYLSWVGRSVRSDEPLPPSPLVAELLDTLASMCGGDVAPAITTR
HPLQPFSRRSYDGSLPSYEPLWAAALAQPAAAAQPFASTLPAVAPQVVLLADFLRFWRNP
VRAWLADRLGLKLARHADDLPVREPFAIDRDSRSDIRDTLVGSLLAGKPLRHAEARLAGQ
GLLPDAALGDACLAQERAASARFAARLPSSLLADTLPPQPVRLQLGGVMLSGELAGLRPE
GLLRVVPRKAYATEFITLWLEHLVRLAAGLPGIAPDSVLYADDGVYRLGASSRDGQPLDA
HALLAAWMARYLQGQSQPLPFFARTSLAYARAEPGKQMGAAQNEWSPDFTGLGRTPQRDD
AANLLAFRHLEPLSDPLFAQLADTLLAPLVGALQLEKD
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaacctgtatcaatccaaccgcctggaagccctgggcattctgtacagccac
ctcacagacagcccgctggccgatgcgttcgcaccggaagtcatcatggtgcaaagccgt
ggcatggggcgctggctgacattgaacctggcgcagcagcgcgggctggcggccaacctg
gaattcgtgctgccggccggctttggctggcggctgatgcaggcagtgctgcccgagctg
ccacccaaatccgcctttgcccccgacgtgttgtgctggcggctgatggacgtgctgccc
acgctggccggcgagccgttcatcccgctgcagcgctatttgcagggtggcgagctggcg
tgcttcgagctggccggcaagattgccgatatctacgaccaatacctggtattccgcccc
gactggatacgcgcctgggaagccggccgcctgctggggctgggcgaagacgaagcctgg
caggccgcgctgtggcaaaggttggccgcagaggtgcccggccgtcaccgcgtgatgatg
ctggacgacttctttgcccgcctgcgcagcgagcacctgccgcagcgcgtgtcggtattc
ggcatcgccaccctggcgcccatgtatctggcgctgctgcagcgcatggccgagcttacc
gaggtgaatgtgttcctgctcaaccccagcgaagcctactggggcgacctgcaggcgcgc
agccgccaggccatgttgtttgacgacgacgccagcgccggcggccacccgctgctggcg
tcgctgggccagcaggggcgcgactttttcgacgagctggccggcggcgtggcgcagccc
atgtcggccttcatggcgccggacggccacagcctgctggcgcgcctgcagcacgatatc
cttacgctgaccccgcctgcggccaacgtggcaccctatcgcgcgggcgatgcgtccatc
cgctgtcatatcgcccacagccccatgcgcgagctggaggtgctcaaagaccagctgctg
gccatgctggccgccgacccgtcgctgacaccggccgatatcgccgtgctcacccccgat
atcaacgcctacgcgccgtacatcgacgccgtattcggctaccgcagcgacgcgccgtcc
atcccctacagcattgccgaccgccgcctggcgcgcgaggtaccactgctggccaccttt
ggcgccgtgctgcagctggccgactcgcgctttgccgccagcgacgtactggccctgctg
gactgcccggcgctcttggcgcgctttggcctggccgacgacgacgtcagcctgctggcg
caatgggtgcgccaggccggcatacgctgggggcgcgacgccgaacacaaagcccggctt
ggcctgcccgccgagcccacgcacacctggcgctgggggctggaccgcctgctgctgggc
accatgctgcccgccagcctggctggcgacggcgcgccgctgtttgccggcctgctgccc
gatagcgccgcccagggccaggccgccgacaagctcgccagcctggccagcctgtacgac
gtgctggcagggttggccgcagactgggcgcagcccgccagcatggccggctgggcgcag
cgcctgcgcgacgccgcggcgcagctgttcctggtggacgaagccgacgaagccgcgctg
cagctgctgcacggcattgccgatacgctcaccgccgacgcctcgctggcgcagtttgac
ggcgcgctgccgctggcggtgatccgtgacgccgtgctgcgccagctggacatgtcgtcc
agcggcggcttccttaccggcgggcttaccttctgcgccatggtgccgatgcgctccatc
ccgttccgcgtgctgtgcctggtgggcatgaacgacggcgcctacccgcgtgacgagcgc
ccggtcagcttcgacctggtagcgcgtaacccgcgccgtggcgaccgctcgcgccgtttc
gacgaccgctacctgtttctggaagccattctgtccgcccgcgacgcgctgtacctgagc
tgggttggccgcagcgtgcgcagcgacgagccattgccgccgtcgccgctggtggccgag
ctgctggacaccctggccagcatgtgcggcggcgatgtggcaccggccatcaccacccgc
cacccgctgcagcccttcagccgccgcagctacgacggcagcctgcccagctacgagccg
ctatgggccgccgcgctggcgcagccggccgccgccgcgcagccctttgccagcacgctg
cccgccgtggcaccgcaggtggtgctgctggccgactttctgcgcttctggcgcaacccg
gtacgcgcctggctggccgaccgcctgggcctgaaactggcgcgccacgccgacgatcta
ccggtgcgcgaaccgtttgccatcgaccgcgacagccgtagcgacatccgcgacaccctg
gtcggcagcctgctggccggcaagccgctgcgccacgccgaagcccgcctggccgggcag
ggcctgctgcccgatgccgcgctgggcgacgcctgcctggcgcaagaacgcgccgccagc
gcccgctttgccgcgcgcctgccatccagcctgctggccgacaccctgccgccgcagccg
gtacggctacagctgggcggggtgatgctcagcggcgagctggccggcctgcgccccgaa
ggcctgctgcgcgtggtaccgcgcaaggcctacgccaccgagttcatcaccctgtggctg
gagcatctggtgaggttggccgcaggcctgcccggcatcgcccccgatagtgtgctgtac
gccgacgacggcgtgtatcgcctgggtgccagcagccgcgatggccagccgctggacgcc
cacgcgctgctggcagcgtggatggcgcgctacctgcagggccaaagccagccgctgccg
ttctttgcccgcacctcgctggcctacgcccgcgccgagccaggcaagcaaatgggcgcc
gcgcaaaacgaatggtcgcccgacttcaccggcctgggccgcaccccgcagcgcgacgac
gcggccaacctgctggccttccgccacctggagccgctgtccgacccgctgttcgcgcaa
ctggccgatacgctgttggcgccgctggtgggcgcactgcagctggagaaggactga
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