Vogesella sp. XCS3: LCH97_16895
Help
Entry
LCH97_16895 CDS
T07617
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00860
Porphyrin metabolism
vox01100
Metabolic pathways
vox01110
Biosynthesis of secondary metabolites
vox01240
Biosynthesis of cofactors
Module
vox_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LCH97_16895 (hemN)
Enzymes [BR:
vox01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
LCH97_16895 (hemN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
UDM16932
LinkDB
All DBs
Position
3533516..3534922
Genome browser
AA seq
468 aa
AA seq
DB search
MTPTINFTPTQCVFDRELIERLEGSGPRYTSYPTADRFHAGFGVSDYEQWLAHRAIGANH
RPISLYVHVPFCNTICYYCGCNKIITKDKTRADAYLDYLEKEIRLVAEKLGSREKVIQLH
FGGGTPTFLSDEQLDRVMGIIRQHFELLPEGEFSIEIDPRKVGRDTVLHLARLGFNRMSI
GIQDFDPVVQEAVNRIQSEEETRVVMDAAREAGFKSISVDLIYGLPKQTAHSLENTVSRV
IAMSPDRIALYNYAHLPTVFMPQRRINEADLPSSATKLDILQNSVQQLAEAGYVFIGMDH
FAKPDDELTRALQQGRLQRNFQGYSTHADCDMIGLGVSSIGKVGPCYTQNEKELDAYYAA
LDAGHLPVLRGMTLTQDDILRRSVIQALMCRFSLSIEAIEQTFAINFADYFAVELPQIRA
FQSEGLLTFDGDFLMVAPKGRFLIRNIAMIFDRHLRERETKARYSKTI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacacccactataaatttcacgccgacgcagtgtgtattcgatagagaactcatcgaa
aggctggaaggttcaggcccgcgctacacctcctacccgactgccgaccgctttcatgcc
ggcttcggggtgagtgattacgagcaatggctggcccatcgtgcgattggcgccaaccat
cggcccatctcgctgtacgtgcatgtccctttttgcaacaccatttgctactactgcggc
tgcaacaagatcattaccaaagacaagacccgcgccgacgcttatctggattacctggag
aaggaaatccgtctggtggccgaaaagctgggcagccgtgaaaaagtgatccagctgcat
tttggtggcggtacgcccaccttcctgtccgacgagcagcttgaccgcgtgatgggcatt
atccgccagcacttcgagctgttgccggaaggcgagttttctatcgaaatcgacccgcgc
aaggttggccgcgacacggtcctgcacctggcacggctgggtttcaaccgcatgagtatc
ggtatccaggattttgaccctgtggtgcaggaagcggtgaaccgcatccagagcgaggaa
gaaacccgtgtggtgatggatgccgcgcgtgaagccggcttcaagtcgattagcgtagac
ctgatttacggtctgcccaagcagacggcgcattcgctggaaaacacggtgagccgcgtg
attgccatgtcgccagaccgcatcgcgctgtacaactacgcgcatctgcccacggtattc
atgccacagcgccgcatcaacgaggcggatttgccctcgtcggctaccaagctggacatc
ctgcagaactcggtacagcagctggctgaggccggttacgtgtttatcggcatggaccac
tttgccaagccggacgacgagctcacccgtgccttgcagcagggccgcctgcaacgcaat
ttccagggctactctacccacgcggactgcgacatgatcggcctgggcgtgtcgtccatt
ggcaaggttggcccctgttatacgcagaacgaaaaagagctggatgcgtattacgccgcg
ctggacgccggccacctgccagtgctgcgcggcatgacgctgacgcaggatgacatcttg
cgccgtagcgtgatccaggcgctgatgtgccgcttctctttgtcgatagaggcgatagaa
cagacttttgctatcaattttgccgattattttgccgtcgagctgccgcagatccgtgct
ttccagagcgaaggtttgctgacctttgatggtgacttcctgatggtggcacccaagggg
cgcttcctgattcgcaatatcgcgatgattttcgaccgtcatctgcgcgagcgtgaaacc
aaggcgcgctattccaaaaccatctga
DBGET
integrated database retrieval system
