KEGG   Vogesella sp. XCS3: LCH97_18425
Entry
LCH97_18425       CDS       T07617                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
vox  Vogesella sp. XCS3
Brite
KEGG Orthology (KO) [BR:vox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vox03032]
    LCH97_18425
   03036 Chromosome and associated proteins [BR:vox03036]
    LCH97_18425
   03400 DNA repair and recombination proteins [BR:vox03400]
    LCH97_18425
DNA replication proteins [BR:vox03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LCH97_18425
Chromosome and associated proteins [BR:vox03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LCH97_18425
DNA repair and recombination proteins [BR:vox03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LCH97_18425
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 Myc-LZ
Other DBs
NCBI-ProteinID: UDM18847
LinkDB
Position
unnamed:114615..114917
AA seq 100 aa
MSKKDVLKAMQEEMAIQGYSYSLREIEGFVDAYNEMLYKLLSSGSSVQIPKVGTFKVSLR
AERTCRNPKSGVSVPVPAQFATKFQVSNILKTKLQQLRAQ
NT seq 303 nt   +upstreamnt  +downstreamnt
atgagcaagaaagatgtactcaaggctatgcaggaagagatggctattcaaggctacagc
tactccttgcgtgagattgagggctttgtagatgcatataacgagatgctctacaaattg
ctgtcctcagggtcgtccgtgcaaattcccaaggttggaaccttcaaggtgagtctccga
gctgagcgaacctgccgaaacccgaagtctggggtgagcgttccggtgccggcgcagttt
gctacgaagttccaagtgtccaatatcctcaaaactaagttgcagcagctgcgagcgcag
taa

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